| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1797 |
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| Symbol | |
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| ID | 3761838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1971554 |
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| End bp | 1973509 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786540 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_392063 |
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| Protein GI | 78486138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000126302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGAAC AAATATCTCA TTCTTTACTC AATGATATTC TAAATCAGAT TAAGCCAGAT
ATTTATGAAC AGGATTTACG GCATTTCTAC ACTCGCCTGG GTGCTAATTT CTACGCCATC
CATTCTTTGT TTGATCGGCT TTACGGCAAT CGACCGGATT TTAAACAACA ATCCCTTCGT
TTAGTCGAAA CCATGGCGCG CCAATACATC AAGCGCCCCG ATAAGCTGAA AGATTTAGAC
ATTGAAAGAG AAGATGACTA CAACTGGTTT CTGAGTCAAG AATGGGTTGG GATGGCGCTC
TACTCCAATG GGTTTGCCAA CGACCTAAAA GGCATGAAAG AGCATTTGAA TTATTTTCAG
GAACTGGGCG TCAATCTTGT CCACATCATG CCGATCATGA AATGCCCGGA AGGACGAAGT
GATGGCGGCT ACGCCATCAG CGACTTTCGC GAAATCGATG AGCGCATCGG AACGTTACAA
GACTTAAATG AACTGTCTTC CGAAATGCAA CAAAGAGACC TGCTTCTGGT ACTCGATGTG
GTGTTAAACC ATACTTCGGA TGAACATGAA TGGGCGCAAA AAGCGCGTTC TGGCGATCCG
GTATATCAAG ATTACTATTA CACGTTTGAA TCCCGCAATA TTCCCGACAT GTTTGAACAA
AGCATGCTGG AAGTGTTTCC TGAAACCGCC CCTGGCAATT TCACCTGGGA TGAGGAAATG
CAGCGCTGGG TCATGACGGT ATTCAATGAT TACCAATGGG ATTTAAACTA CAGCAACCCC
GCTGTCTTTA TCGAAATGCT GGACGTAATT CTGTTCTGGG CGAATCAAGG TGCCGACATT
CTACGACTGG ATGCCGTTGC CTTTCTGTGG AAAAAGATTG GAAGCACCTG CCAGAATGAA
CACGAAGCCC ATTTGATATT ACAGCTCCTA AAAGACTGTT GTCAGGTCAC CGCGCCCGGA
GTGCTCTTTA TTGCGGAAGC CATTGTGGCG CCCGTTGAAG TCACCAAATA TTTTGGAGAA
GATGCCGTCA TCGCCAAGGA ATGCGAAATT GCTTATAACG CCACCTTTAT GGCGTTGATG
TGGGATGCGG TCGCAACGAA AAATGCCAAA CTGCTGAATC AGGGAATCAA AAGTCTGCCG
GTCAAGTTGG AACGAGCCAC TTGGCTGAAC TATGTGCGCT GCCATGATGA CATTGGGCTT
GGGTTCGATG ACAACGACAT TATCAAAGCC GGTTACGAGC CCAATTCTCA CCGTCGCTTT
TTGATTGATT ACTTAACCGG GAAATTCGAT GAATCGCATG CGCGCGGCTT GCCGTTTGGT
GAAAATGCCA AAACTGGAGA TGCCCGTATT TCAGGGTCCC TTGCGTCCCT GGTTGGGTTG
CAATACGCCA TGGAAACGGG TGACATTGAA GCCACCGAAG ATGCCGTGAA AATCATTTTA
TTACTGCACA GCATGATCCT GTCATTTGGC GGCATTCCCC TGTTGTATTA CGGTGATGAA
ATCGGCACCT TGAATGACGA TGCTTACTTA TCCGATCCAA ACAAGATGGA TGACAATCGT
TGGGTTCATC GCCCTCACAT AGACTGGGAA AAAACCGAAC GCCGTAACTC AACGGGTACC
GTCGAATATC AAATCTTCAG TGCGTTGAAA AAAATGATTG CAGTACGTAA AGAAATCAAT
GTGTTTTCAG ACTTCAACAA CCGTGAATTG ATCGAAGTCG ACAACCCAAA CCTGTTTGTT
ATCAGTCGAT TCGATCCGCA TAAATTCAGT GACCGCGTGC TGGTGGTGGC TAACTTCAAC
AGCAAACCTC AATCTTTAAA CCTGGAAGAA GTAAGCAGTT GGGGCAGTTA TCAAAATGGT
GAGTTAATGG ACTTATACAC ACGACAAAGC CCTGAAATCT TCAACAATGC GCTGATTGTA
CCTGGCTTCA GTTTCTATTG GCTATATGAA ATGTAA
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| Protein sequence | MYEQISHSLL NDILNQIKPD IYEQDLRHFY TRLGANFYAI HSLFDRLYGN RPDFKQQSLR
LVETMARQYI KRPDKLKDLD IEREDDYNWF LSQEWVGMAL YSNGFANDLK GMKEHLNYFQ
ELGVNLVHIM PIMKCPEGRS DGGYAISDFR EIDERIGTLQ DLNELSSEMQ QRDLLLVLDV
VLNHTSDEHE WAQKARSGDP VYQDYYYTFE SRNIPDMFEQ SMLEVFPETA PGNFTWDEEM
QRWVMTVFND YQWDLNYSNP AVFIEMLDVI LFWANQGADI LRLDAVAFLW KKIGSTCQNE
HEAHLILQLL KDCCQVTAPG VLFIAEAIVA PVEVTKYFGE DAVIAKECEI AYNATFMALM
WDAVATKNAK LLNQGIKSLP VKLERATWLN YVRCHDDIGL GFDDNDIIKA GYEPNSHRRF
LIDYLTGKFD ESHARGLPFG ENAKTGDARI SGSLASLVGL QYAMETGDIE ATEDAVKIIL
LLHSMILSFG GIPLLYYGDE IGTLNDDAYL SDPNKMDDNR WVHRPHIDWE KTERRNSTGT
VEYQIFSALK KMIAVRKEIN VFSDFNNREL IEVDNPNLFV ISRFDPHKFS DRVLVVANFN
SKPQSLNLEE VSSWGSYQNG ELMDLYTRQS PEIFNNALIV PGFSFYWLYE M
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