Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1734 |
Symbol | |
ID | 3761033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1894526 |
End bp | 1895524 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786472 |
Product | diphosphomevalonate decarboxylase |
Protein accession | YP_392000 |
Protein GI | 78486075 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACA AACAACGCGA TTTTGTGGAT CAGATTATTC CTCATAGGAC ACCGACGCAA AAAGGAACAG GAAAAGCACC GGTTAATATT GCGCTCAGTA AGTATTGGGG AAAACGCAAT GTTGATTTGA ACCTACCTAC CAACAGCAGC TTATCCATCA GCCTGCCAGG TTTAGGAACA AAAACACAGA TTGAATGGGT TGAAAACCAG TCCGATCATA TTTATCTAAA TGAAACAAAA GTCGCTTCTG ACGACTCTTT TGCTCAAAGA ATCCGCCTGT TTTTAGACTT ATTTCGACCA AATACGCAAG GAGGGTTCAT TGTAAACACC CTCAATAGTG TTCCAACGGC AGCAGGATTG GCTTCTTCAG CTTCGGGTTA TGCCGCGTTA GTGTTGGCTC TAAACGACTG TTTTCAATGG GACCTGCCTT TAAAACGCCT TTCCTTACTG GCTCGACTTG GCAGTGGCAG TGCCAGCCGA TCTTTATATG ATGGGTTCGC ATTATGGCAC AAAGGACAAC TCGATAACGG GATGGACAGC TATGCTGAAA AAATTGACCA GGCCTGGCCA GAATTATGCA TTGGATTACT GGAAATTGAT GTGTCAACCA AACCGATCAG TTCCACGCAA GGCATGCAAA ACACGGTCAA TCATTGCGAA CTGTATCAAG CCTGGCCCGA TAAAGCAGAG GCCGATTTAC AAAAAACTCA TCAAGCAATT CAAGATAAAG ATTTTCAACA ACTCGGACAA ACCTCAGAAA ACAATGCACT GGCCATGCAT GCTACGATGA TTGCAACCTG GCCGCCAATT CTCTACTGGC AACCGGAATC GGTCGCCGCC ATGCACAAGG TTTGGCAGCT TCGCGCTGAA GGATGTGACG TGTATTTCAC TATGGACGCG GGACCGAATT TAAAACTGTT GTTTTTAAAG CAAGATGCCC CTATGATTCA AACTCACTTT CCTTCGATTA AAGTTATTCA GCCTTTTTCT GATACGTGA
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Protein sequence | MKNKQRDFVD QIIPHRTPTQ KGTGKAPVNI ALSKYWGKRN VDLNLPTNSS LSISLPGLGT KTQIEWVENQ SDHIYLNETK VASDDSFAQR IRLFLDLFRP NTQGGFIVNT LNSVPTAAGL ASSASGYAAL VLALNDCFQW DLPLKRLSLL ARLGSGSASR SLYDGFALWH KGQLDNGMDS YAEKIDQAWP ELCIGLLEID VSTKPISSTQ GMQNTVNHCE LYQAWPDKAE ADLQKTHQAI QDKDFQQLGQ TSENNALAMH ATMIATWPPI LYWQPESVAA MHKVWQLRAE GCDVYFTMDA GPNLKLLFLK QDAPMIQTHF PSIKVIQPFS DT
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