| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1723 |
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| Symbol | |
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| ID | 3761022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1883662 |
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| End bp | 1884552 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637786461 |
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| Product | type II secretion system protein |
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| Protein accession | YP_391989 |
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| Protein GI | 78486064 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATGGG TTCTACTGGC CGTCGCGATT TTATTTTTTA CCGCCACTTT ATTGGTTGTT
AAAACGTTTA AAAAAAATCA GCAAGCACAA GAAGATATAG AATATCTCAA ATTGCGGATT
GGACTTGTTA ATCAGTATCA AGCCAATGTA AACCGTCATA AAACTTGCCA TTGGTGTGCT
TTGGGCGCCT TTATGGGGCC TAAAAATGAA AAAGAGATTA ACGCAAATCG TCAATTTTTG
ATGAATGCCG GGTTTCGAGA AGAACATCAT CTTGGGGCTT ACTTTTTTAT TAAATACGCA
CTGGTGTTCA GTTCTTTACT GGTGATGTTG GTGTTGTGGA GTTGGTTTCA AGTCAGCCCA
ATTGTTGCGA TTTTAGTGCC GCTGGCTTTT TTATTATTGC CGGAGCGGGT TCTGATTTTT
TGGGGAAATC ATCGACTGAA TAAAGTGAAT ATCGCGTTAC CGGACTTTCT GGATATGGCG
AATATTTGTA TGAGTGCCGG ACTAAGTTAT TTAGAGGCTA TAAAACGCGT CTCTAAAGAA
CTGGAAAGTA CCTTCCCTGA AATTTGTTAT GAATTTAATT TTTTAATTGA ACAAATTAAA
ATTGGCGTAC CGCGGCAAGA AGCATTAAAG CAGTTTGCGT TGCGTAACCC TTCCAAAGAC
ATTCAAGATT TGGTGCAAAT GCTGATTCAA AACGAGAAAT TGGGTAGCCC AATTTCGACG
GCGCTGAATG AGTTTTCACG CCGAATGTAT CAAAAACGCG AAAGCGCGAT GGAAGAAAAG
GCCGCCAAAA CCTCTGCTAA AATGGCGATT GTTATTTTAC CTTTTTTAAT GCTGCCGTAT
TTTATGTTGA TGCTGGGAGA GAAAATAGTG ATGTTGGGAA GAAATTTTTA A
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| Protein sequence | MVWVLLAVAI LFFTATLLVV KTFKKNQQAQ EDIEYLKLRI GLVNQYQANV NRHKTCHWCA
LGAFMGPKNE KEINANRQFL MNAGFREEHH LGAYFFIKYA LVFSSLLVML VLWSWFQVSP
IVAILVPLAF LLLPERVLIF WGNHRLNKVN IALPDFLDMA NICMSAGLSY LEAIKRVSKE
LESTFPEICY EFNFLIEQIK IGVPRQEALK QFALRNPSKD IQDLVQMLIQ NEKLGSPIST
ALNEFSRRMY QKRESAMEEK AAKTSAKMAI VILPFLMLPY FMLMLGEKIV MLGRNF
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