Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1548 |
Symbol | |
ID | 3760807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1690274 |
End bp | 1692835 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786284 |
Product | ATP-dependent protease La |
Protein accession | YP_391814 |
Protein GI | 78485889 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.984629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGAAG AAGACATCGA ATTTAATGAA TTTGTAGACA ATACTTCTGA ATTTGAAGAG GCTGAATCAA ATCAACAAAA TGAAGCGATC GATGGCGAGC ACATTGCCAA CGACCAATCT GACATGGATT CCACCATGAC GCAGCTGGTA ACAGCCAATA GCTCCAAACC GGACTCGTTA TACCTATTAC CGGTTAAGGA ACGTCCTTTC TTTCCAGGCC AGACTCTGCC GATTATTTTG GATAAAAACT CTTGGTCTAA AACCATCAAG AAAGTGATTG ATGAAAAAAT TCATTATATC GGGATCATTT ACGTTGAAGC AGACGATCAC CATAAGGCCA AGCCGAAAGA TTTTGCTAAA ACAGGCACAT TAATCCGTAT CCATGAACCC AAAATTAAAG AAGATTACAT TCAATTGATT GCGGAAGGTG TCTGTCGTTT TCAAATTGCA GACTGGCTCA GCAGCTCGGC TCCTTTTCGT GCCCGAGTAA ATTACCCGAA TGACATTCGT AATGGCAGTC CGAAAGAATT CAAAGCCTAT GGCCTTGCGA TCATGAACGC CTTTAAAGAA TTGCTACCAC TCAACCCTCT TTACAGTGAA GAGTTGAAGT ACTTCTTAAA TCGCTACAGC GCGTCGGATT CTCAGCATTT AGCGGATTTC GCGGCCAGCT TAACCGCCGC CAGTAATGAA AAACTACAGG ACTTACTCGA TACATTGGAT TTAAGTGAGC GCCTGGAAAA AGTACTGTCT TTATTCAAAC ATGAGATTGA AGTCACCAAG CTTCAATTTA ATATTCGTGA GCGCGTGGAA GAAAATCTGA GTCAACAACA AAGAGAGTTC TTCCTGCACC AGCAATTAAA AGAAATTCAA AAAGAGCTGG GCATGGTCAA AGATGACCGC ACCGCGGATG CGGATTTATT CCAGGAACGC TTAGACAAGC TTGAGCTTTC AGAGGAAGCC ACCAAAAAAG CAGAAGAAGA GCTTGGTAAA ATCAATATGC TGGACCCACA GTCACCCGAA TATGGCGTGG CCCGCAATTG GTTAGATTGG TTAACACAGC TTCCTTGGGG CAAATACAGC GATGATAAGC TCGACCTTGG ACGTGCCCGA AAAATTCTTA ACAAAGGCCA TGATGGTCTG GATGACGTCA AAGATCGCAT TCTGGAGTTT TTAGCCGTTG GTGCCTTAAA AGGTGAAATT TCCGGCTCCA TTATCTGCTT GGTCGGTCCA CCAGGGGTGG GGAAAACCTC TATAGGCCGA TCCATTGCAG ATACGTTGGG GCGTAAATTT TATCGTTTTT CTGTAGGAGG CATGCGAGAC GAAGCCGAAA TTAAAGGGCA TCGTCGTACG TACATTGGGG CTATGCCCGG CAAATTTGTA CAAGCCTTGA AGGATTGTGA AACCGCCAAC CCAGTCATTA TGCTGGATGA AATCGATAAG ATTGGTTCTT CCTATCAAGG AGATCCCGCT TCGGCCTTAT TAGAGGTGCT TGACCCGGAA CAAAACTCTG AATTCATGGA TCATTATATG GACGTGCGTT TTGACTTATC CAAAACGTTG TTCGTCTGTA CGGCAAATAC GTTAGACAGC ATTCCTGGTC CATTACTTGA TCGAATGGAA GTAATTCGCT TATCCGGCTA CATCACCGAA GAAAAAATTC AGATTGCCAA ACACCATTTA TGGCCGTCTT TATTGGAAGA TGCCGGGTTG AATAAAAAAC AAATTCAAAT CACTCCAGCC ACCATTCGTC ACGTAATTGA AGGTTATGCT CGTGAGGCCG GTGTTCGAAA CCTGAAGAAG CAATTAGCCA AATTGATTCG CAAGCTAGCG ATTAAATTCG TCAACGGTGA CATGGAACAA ACCACATTGC ACGTCAATGA CCTGGAAGAA ATGCTGGGGC AACCTCGTTT TACCCCTGAA AAAACCAACC AACAAATGGG AACGGTTACC GGACTGGCTT GGACCTCAAT GGGTGGCGCA ACACTGACGA TTGAAGCCAG CCGGGTTCAC ACGTTGAACA GAGGATTTAA ATTGTCCGGT CAATTAGGGG ATGTGATGCA GGAATCGGCC AGCATTGCTT ACAGTTACAT TGCCTCTAAT TTGGATAAGT ACAAAGCGGA TCCAGAATTT TTCGATAAAG CTTTTGTGCA CTTACACGTG CCTGACGGCG CGACACCAAA AGATGGGCCT AGCGCGGGTG TCACCATGGC CACCGCGTTG CTGTCGCTCG CGCGTAATGA AGCAATTAAA AAGCCTCTGG CGATGACAGG TGAACTCAGC TTGACGGGTC AAGTGCTTCC TGTGGGGGGC ATTCGTGAAA AGGTTATTGC CGCTCGACGC GTTGGCATTA AGGAATTGAT CTTACCGGAT GAAAACCGTA AAGATTATGA TGAACTGCCG GATTATTTAA AAGAAGGGAT GACGCTGCAC TTTGCCAAAC ATTTTGATGA CGTGGCAAAA CTGACTTTTC ATATTCGAAG CAAATCCAGT GCATTAAAAA AATATTTAAG TAAGGCTGTT ATATCGACTG AAGAAAAGAC AGAGCAAGAA ACAACGTCTT AA
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Protein sequence | MHEEDIEFNE FVDNTSEFEE AESNQQNEAI DGEHIANDQS DMDSTMTQLV TANSSKPDSL YLLPVKERPF FPGQTLPIIL DKNSWSKTIK KVIDEKIHYI GIIYVEADDH HKAKPKDFAK TGTLIRIHEP KIKEDYIQLI AEGVCRFQIA DWLSSSAPFR ARVNYPNDIR NGSPKEFKAY GLAIMNAFKE LLPLNPLYSE ELKYFLNRYS ASDSQHLADF AASLTAASNE KLQDLLDTLD LSERLEKVLS LFKHEIEVTK LQFNIRERVE ENLSQQQREF FLHQQLKEIQ KELGMVKDDR TADADLFQER LDKLELSEEA TKKAEEELGK INMLDPQSPE YGVARNWLDW LTQLPWGKYS DDKLDLGRAR KILNKGHDGL DDVKDRILEF LAVGALKGEI SGSIICLVGP PGVGKTSIGR SIADTLGRKF YRFSVGGMRD EAEIKGHRRT YIGAMPGKFV QALKDCETAN PVIMLDEIDK IGSSYQGDPA SALLEVLDPE QNSEFMDHYM DVRFDLSKTL FVCTANTLDS IPGPLLDRME VIRLSGYITE EKIQIAKHHL WPSLLEDAGL NKKQIQITPA TIRHVIEGYA REAGVRNLKK QLAKLIRKLA IKFVNGDMEQ TTLHVNDLEE MLGQPRFTPE KTNQQMGTVT GLAWTSMGGA TLTIEASRVH TLNRGFKLSG QLGDVMQESA SIAYSYIASN LDKYKADPEF FDKAFVHLHV PDGATPKDGP SAGVTMATAL LSLARNEAIK KPLAMTGELS LTGQVLPVGG IREKVIAARR VGIKELILPD ENRKDYDELP DYLKEGMTLH FAKHFDDVAK LTFHIRSKSS ALKKYLSKAV ISTEEKTEQE TTS
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