Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1284 |
Symbol | tsf |
ID | 3761673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1399425 |
End bp | 1400309 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637786016 |
Product | elongation factor Ts |
Protein accession | YP_391553 |
Protein GI | 78485628 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000149192 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTA CTGCATCTAT GGTAAAAGAA CTGCGTGAAG CAACTGGCGC AGGCATGATG GATTGTAAAA AAGCACTTGC TGAAACGGAT GGAAACATGG AAGAAGCGAT TGAGTTTCTT CGTAAGAAAG GTATGGCAGG CGCTGATAAA AAAGCAGGTA GAACTGCAGC AGAAGGTGTG ATTGCAATCG CAGTTTCTGA TGATAAGAAA AAAGCCGCAA TCGTTGAGGT GAACTGTGAG ACTGATTTCG TTGCAAAAGG CGACGACTTT AAAGCATTTG CAGATGAAAT CGCAGCGATT GTATTAGCGA CTGGGACAGT TGATGTTGAT GCGCTAATGA ATGAAAAAAT GGCGAACGGC CAAACGATTG ATGAAAAACG TCGTGAAATG ATTGGTAAAA TCGGTGAAAA CATGGCTGTA CGTCGTGTGG AATTGGTTGA GTCAAACGGC ACAATCGGTA AATACCAACA CGGTGAGAAA ATCGGTGTTG TTGTTGCGAT GAATGGTGGT GACGATGCGT TGGTTCGTGA TGTTGCAATG CATGTTGCGG CTGCGAATCC TTCTGCAATC TCTGCTGATG ATGTTGATCA AGAAATGTTG GAAAAAGAGC GTAAGTTCCA AATCGAACAG GCACAAGATT CTGGCAAGCC AGCTGAAATC ATTGAAAAAA TGATTGATGG TCGTATGCGT AAGTATTTGC AAGAAATTAC ACTATTAGGT CAGGCTTTTG TTAAAGACCC TGATCAAACA GTTGAAAAAT TGCTGAAAGC TTCTGATGCG TCTGTTTCTA ACTTTGTTCG CTTGGAAGTG GGTGAAGGAA TTGAAATTGA AGAAACAAAC TTCGCTGATG AAGTGGCGGC CGCTGCAGCT GCAGTAAAAG GGTAA
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Protein sequence | MAVTASMVKE LREATGAGMM DCKKALAETD GNMEEAIEFL RKKGMAGADK KAGRTAAEGV IAIAVSDDKK KAAIVEVNCE TDFVAKGDDF KAFADEIAAI VLATGTVDVD ALMNEKMANG QTIDEKRREM IGKIGENMAV RRVELVESNG TIGKYQHGEK IGVVVAMNGG DDALVRDVAM HVAAANPSAI SADDVDQEML EKERKFQIEQ AQDSGKPAEI IEKMIDGRMR KYLQEITLLG QAFVKDPDQT VEKLLKASDA SVSNFVRLEV GEGIEIEETN FADEVAAAAA AVKG
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