Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1183 |
Symbol | |
ID | 3760601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1292227 |
End bp | 1293204 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785911 |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_391452 |
Protein GI | 78485527 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCTT ACATTCTCCG TCGATTATTG TTTGCTGTAC CGATTCTAAT CGGGGTAAAT CTGATTACCT TTGCTTTATT TTTTATGGTA AATACCCCAG ATGACATGGC GCGTGCCCAT CTGGGGGCCA AACAAACCTC GCCTGAAATG ATTACTGCCT GGAAGCAAAC CCATGGCTAC GATAAGCCCT TGTTTTACAA CAAAGAGGCT TTCGGTCTGT CAAAACTCAA TGACACATTA TTTGTACAGG AATCCTTAAA ACTGTTTTGG TTTGATTTCG GACAATCCGA CGATGGTCGC CAAATTTCTG CCGATATTAA AGAGCGAATG TGGCCCAGTT TAGCGATTGC CTTACCCACC TTCATAATAG GGTTAATCAC CAATATCGCC ATTGCATTGC TCATTGTGCT TTTCCGTGGC TCCGTTCTAG ATTCCGCCAC CATGGTGGTT GCGGTTGCGA TTATGTCAAT ATCGGGACTG TTTTACATCA TCGCCGGTCA AGTTCTATTC AGCAAAATAT GGCACTGGGT CCCCATCTCG GGCTATACCG ATGGCTGGGA AGGCCTGAAA TTCTTAATCC TTCCTGTTTT CATTGGTATT TTTGCCGGGC TCGGTGCCGG CGTGCGCTGG TATCGCAGTA TTTTCTTGGA AGAAATCAAT AAAGACTATA TTCGAACCGC CCGCGCCAAA GGGCTGTCGG AAATTAAAGT TTTGTTTGGG CATTTATTAC AGAATGGATT GTTACCCATT TTAACTGGAG TGGTAGTGGT CATTCCTACA TTGTTCATGG GAAGCTTAAT CATGGAATCG TTTTTTGGGA TCCCCGGCCT TGGTAGCTAT ACCATTGACG CGATTCATGC ACAAGACTTC GGGATTGTAA AATCGATGGT CTTTTTAGGC TCGGTTCTTT ATATTATTGG CCTGATCCTA ACCGATATTT CCTATACCAT TTTTGATCCG CGCGTGAGGT TGAATTGA
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Protein sequence | MLAYILRRLL FAVPILIGVN LITFALFFMV NTPDDMARAH LGAKQTSPEM ITAWKQTHGY DKPLFYNKEA FGLSKLNDTL FVQESLKLFW FDFGQSDDGR QISADIKERM WPSLAIALPT FIIGLITNIA IALLIVLFRG SVLDSATMVV AVAIMSISGL FYIIAGQVLF SKIWHWVPIS GYTDGWEGLK FLILPVFIGI FAGLGAGVRW YRSIFLEEIN KDYIRTARAK GLSEIKVLFG HLLQNGLLPI LTGVVVVIPT LFMGSLIMES FFGIPGLGSY TIDAIHAQDF GIVKSMVFLG SVLYIIGLIL TDISYTIFDP RVRLN
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