Gene Tcr_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1120 
Symbol 
ID3762061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1208805 
End bp1209428 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content39% 
IMG OID637785841 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_391389 
Protein GI78485464 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGC GGCTAAAGCG ACATTGGAAT CAAAAGCGGT TGAAAGATCC ACGCTTTGCG 
TTCTTATTCA ATACTCCATC GGATGATGAA GTTGTTTGTT TTGATTGTGA AACAACGGGA 
TTAAATCCAC GAAAAGACAG AATTGTTTCG TTAAGTGCTA TAAAAATCCG AGGGAACGAA 
GTCTTGACGA GCGAAGCGTT AAACTTGACG TTTGTGCAAG AGGCGGCTAT TTCAGAAGAG 
AGTATTAAAA TCCATTGGAT TCGCAATGAA GACACTAAGG CCGGGTTGAG CGAGCAGGAA 
GGCATTGAAG CGTTCCTACA TTTTATCGGT TCTCGACCGT TGGTCGGGTA TTATTTGGAA 
TTTGATGTCG CGATGGTCAA CCAGATTATC AAGCCTTGGT TGGGCATTAC GTTACCAAAC 
GCTCAAATTG AAGTGTCATC TCGTTATTAT GATTATAAAG AGGAAATTAT TCCTAAAAAA 
ATCATAGACT TGACTTTTGA TGCGATTTTA AAAGATTTAG AATTGCCGAA TTTAGGACAG 
CATGATGCGT TCAGTGATGC ATTTATGACC AGTCTGATCT ATATCAAATT GAAGTCATTA 
GAAAACTACC AAGGCCTTTA TTGA
 
Protein sequence
MFERLKRHWN QKRLKDPRFA FLFNTPSDDE VVCFDCETTG LNPRKDRIVS LSAIKIRGNE 
VLTSEALNLT FVQEAAISEE SIKIHWIRNE DTKAGLSEQE GIEAFLHFIG SRPLVGYYLE 
FDVAMVNQII KPWLGITLPN AQIEVSSRYY DYKEEIIPKK IIDLTFDAIL KDLELPNLGQ 
HDAFSDAFMT SLIYIKLKSL ENYQGLY