Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0770 |
Symbol | |
ID | 3761897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 840600 |
End bp | 841844 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785488 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_391040 |
Protein GI | 78485115 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.294803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTGA TAAGTAGAAG ACTAAATATG CAAAGCCCTG AACAGGTGGG TTCTCAATCA TTACATATTG AAAATAAGAA ATTGTATTCG GTGTTTCAGC CGATTTACAG TTTTTCGAAC CAAGCCTGTG TGGGAGTGGA AGCTCTGGTA AGAGGCACCT CTTTAGAGAC GGGGTTTCAA GTGACGGTGA ACGAGTGTCT GAGCGTTCCT GATTCCATGA ATCGAGCGGA TTTCAGTCAG GCGTTGAATC ATTTGCATGT GAAGAACTGG CAACAATCCA AATTGCCTGA TAGTTGGTTG TTTTTGAATT TGGACTTTGA AAATGTCAGT ACTCTGGATG ATATTTGTAT TGAAAAAGTG CTCAAAGATT TAGGCGTTAA AGGGCATGAA ATTGTCATTG AAGTGGTTGA AAGTGAGATC ACGGATGAAA CGCTGTTTGA AGAGGTTATA GATACCTTGA GACGCTTAGG GTGTTTGATT GCTTTAGATG ACTTTGGTGC GGGGCATTCG AATGTGGACC GTATCTGGAA AGCGCAACCG GATATTGTGA AGCTGGATCG TGGGGTGTTG CTGGAAGCTA CCAAGAGTTT ACGAAGCCAG AGCATTCTTA AGAATTTGAC ACGCTTGATC AAAGAAGCGG GCAGTGTGTG TTTGCTGGAA GGTGTTGAGA ATAAAGAACA AGCGCTGTTG GCCATGGATG CCGGTGTGGA CTTGGTGCAA GGGTTTTATT TTGCCCGCCC GAATCGGTTA CTTGATCAGG TGGAAAAAGG TCAAGCCTGT GTGAAAGAAG TGATTGATGA GTACCCTGTG TATATCAAAG AGCGGGCTTT TATTTCCAGT ATTCAACTCA AAGAATATGA GTCATTGTTT GAATCAATGT CCGATTCCGG ACGATTTGAT TTTCTGGAAC AAAAGATGGC CAGTCATGCG TCCAACCTTT CGTTTGTGAA GCGCTTTTTT ATCCTGGACC AAGACGGGTT TCAGGTCAGC GATGAATATA ACACGCCGAG TGTTAATAAT CGTGTTGAGG TTTTGAAGAA AGGCAAAGGG CTTTGTTGGA AAAACCGCCG TTATTTTACT AAGGCACTGC AAAAGTCGGG ACAGGTGCAT GTGTCGGAAC CGTATCGATC ATTGATTGAT ATGCAGCTGT GTTTCACTAT CTCAAAACAA ATCATATTGG AAGAGGGCAG TTTTGTAGCT TGCTTCGATG TGGTCTACCG TGACAAGTCT ATGGAATCGG TTTAA
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Protein sequence | MTVISRRLNM QSPEQVGSQS LHIENKKLYS VFQPIYSFSN QACVGVEALV RGTSLETGFQ VTVNECLSVP DSMNRADFSQ ALNHLHVKNW QQSKLPDSWL FLNLDFENVS TLDDICIEKV LKDLGVKGHE IVIEVVESEI TDETLFEEVI DTLRRLGCLI ALDDFGAGHS NVDRIWKAQP DIVKLDRGVL LEATKSLRSQ SILKNLTRLI KEAGSVCLLE GVENKEQALL AMDAGVDLVQ GFYFARPNRL LDQVEKGQAC VKEVIDEYPV YIKERAFISS IQLKEYESLF ESMSDSGRFD FLEQKMASHA SNLSFVKRFF ILDQDGFQVS DEYNTPSVNN RVEVLKKGKG LCWKNRRYFT KALQKSGQVH VSEPYRSLID MQLCFTISKQ IILEEGSFVA CFDVVYRDKS MESV
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