Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0734 |
Symbol | |
ID | 3762109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 807390 |
End bp | 808091 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785450 |
Product | ribonuclease III |
Protein accession | YP_391004 |
Protein GI | 78485079 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0114504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAA TGGAAAAACA GGCTAAGCTT AATCGGCTTT CTAAATCATT AGGTTACCAA TACAAAAACA TTGAGTTTTT GCAAAGAGCG TTGACGCATC GAAGCATGGG AGCCAAGAAT AATGAGCGAT TAGAGTTTCT AGGAGACAGC CTGGTTAACT TTATGATTGC AGATGCGTTG TTTCATCAGT TTCATAAAAT CTCTGAAGGG GATTTAAGTC GAATCCGAGC CTTTTTAGTT AAAGGGGAGA CGTTGGCTAA AATCGGTAAA GAATATCAAC TGTCTGATTA TTTGATGCTG GGTCCTGGTG AACTGAAAAG CGGTGGTTAT CGTCGCGAAT CGATTATTGC CGATACGGTT GAAGCGATTA TTGCTTCCGT TTACGAAGAT GGTGGATTAG ATGCTTGTCG CGCGTTTGTG ATGCGTCTTT ATGAAAACCG ATTGAAAGAG TTGGATCCTT CCAAAATTGG AAAAGATCCA AAAACACGCT TACAGGAATT TTTACAGTCT AATCGTGAAC AATTGCCTGA GTACAGTGTG ATGACAGTCA ATGGGCCTGC ACATGCGCAA GAGTTCACGG TCTCGTGTTA TGTGGCAAAA TTAAATAGAA AATTTGAAGC CACCGCGACA AATCGCCGAA AAGCCGAACA AGTAGCGGCG CAAGAAGCCT TAGATATTTT GGAGAACGAC GATAATGACT GA
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Protein sequence | MSEMEKQAKL NRLSKSLGYQ YKNIEFLQRA LTHRSMGAKN NERLEFLGDS LVNFMIADAL FHQFHKISEG DLSRIRAFLV KGETLAKIGK EYQLSDYLML GPGELKSGGY RRESIIADTV EAIIASVYED GGLDACRAFV MRLYENRLKE LDPSKIGKDP KTRLQEFLQS NREQLPEYSV MTVNGPAHAQ EFTVSCYVAK LNRKFEATAT NRRKAEQVAA QEALDILEND DND
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