| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0642 |
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| Symbol | |
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| ID | 3760481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 719966 |
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| End bp | 721171 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637785355 |
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| Product | type II secretion system protein |
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| Protein accession | YP_390912 |
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| Protein GI | 78484987 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTAATT ATCGCTATCG AGGCATTAGT CAGACGGGTA AAAGGGTTCA AGGAGAGATG
CAAGCTTCAA ATGAACAGGA CCTTGAGCAA CGTTTACGTG CCATCAATAT TGATTTGCTG
ACGTTTAAAA CCAAGACTTC CAGAGGGAGT GGATGGCTCA AGCGCCGTAA GGTAACTCGA
CGCGATGTTA TTGTGATCAC CAGTCAGCTA CGCCAGCTTT TAAAAGCGGG GGTGCCGTTG
ATGGATATTT TAGACGATTT GCGCCGAACG TATGAAAATG AGGCCGTATG CGAAATTTTG
TCGTCAATTT ATAAATCCAT GGAAGGCGGA GAAAGTTTTT CTTTAGCATT AAAAAATTAT
GAAGCCGTAT TTGGAAAAGT GTATGTGTCT CTCGTAGCGG TAGGAGAGAA AACTGGGCAA
CTTGATCAGG TACTGGAAAA CTTAGAAAAC ACAATGAAAT GGGAAGAGTC GTTAGCGTCT
AAAGCGAAAA AAGTCATGAT TTATCCTGCG ATTGTTGCCA CGGTTGTTCT CGCCGTAGTG
GTCTTGTTAA TGGTTTTTGT CGTTCCAGAA CTCCTTTCCT TTATAAATGA AATGGATGGC
AGCTTAGGAT TTGCAACTGT ATCCTTGATT GCGACGTCGC ATTTCATTAG AGAATACATC
GTTTTTATTG GCCTCTTGTT GATATCGGCG TTTTATCTTT TAAAGTGGTG GTTAAAAAAA
TCACACGCTT TTCGAGTGAA ATTTGATCAT TTTATTTTCA AAATTTATGT GTTTGGACCG
ATTCTATTAA AATTGAAAAT CGCTCGCTTT GCCAGTACTT TATCCATTAT GTATGGCGCA
GGGATAAACT TTAATGACAG TTTAAAATTG GCTGCAATGG TTACGGGTAA TGCCTATTTG
GAAGAACGGA TTTCGGAATC TAGACACCTG ATTGAAGAGG GTGAAACAAT TTATAAAGCG
TTTGATTTGT CCGGGTTGCT ACCGCCTTTA GCCGTTAGGA TGGTCAAGGT CGGCGAGCAA
AGCGGGAATA TGGACGAGGC CCTTCACAAT GTGAGTGAGT ATTACGACAC GGAAGCCAAG
GATTTAATTG AAAAAATAGA ACCTGCGATT GAACCGATTT TAACGGTGGT GATGGCATTA
ATGGTCGGTT GGGTAATGAT GGCGGTGCTT GGCCCTGTTT ACGAAACGAT TTCGAAGGTG
CCATAG
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| Protein sequence | MRNYRYRGIS QTGKRVQGEM QASNEQDLEQ RLRAINIDLL TFKTKTSRGS GWLKRRKVTR
RDVIVITSQL RQLLKAGVPL MDILDDLRRT YENEAVCEIL SSIYKSMEGG ESFSLALKNY
EAVFGKVYVS LVAVGEKTGQ LDQVLENLEN TMKWEESLAS KAKKVMIYPA IVATVVLAVV
VLLMVFVVPE LLSFINEMDG SLGFATVSLI ATSHFIREYI VFIGLLLISA FYLLKWWLKK
SHAFRVKFDH FIFKIYVFGP ILLKLKIARF ASTLSIMYGA GINFNDSLKL AAMVTGNAYL
EERISESRHL IEEGETIYKA FDLSGLLPPL AVRMVKVGEQ SGNMDEALHN VSEYYDTEAK
DLIEKIEPAI EPILTVVMAL MVGWVMMAVL GPVYETISKV P
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