Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0433 |
Symbol | |
ID | 3761252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 486111 |
End bp | 486812 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637785144 |
Product | ABC transporter related |
Protein accession | YP_390703 |
Protein GI | 78484778 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCTAC TGAATTTACA CAACATCGGA AAATCTTACC ATCAGGGTGA GTTAGAAGTG TCTGCACTTA AGGACATCAA CCTTAAAATA CAAGAAGGCG AGTTTGCTGC ACTTGTCGGT CCATCAGGTT CAGGTAAAAC CACGTTACTT AATATCATTG GCGGGTTAGA CATTCCATCC ACGGGTTCTA TCCAAATACA TGAAACCGAC TTAAAGACTT TATCAGAATC AGAACTTTCA GACTTTCGTT TATTTCAGCT GGGGTTTATT TTTCAGGCCT ACAATCTGGT TCCAGTATTA AATGCACTCG AAAATGTAGA ACTGGTCATG GTACTCCAAG GGCGCCCGAA AATAGAACGC CGTGAAAGAG CGGAACATTA CTTAGGGTTA GTCGGCTTAC AGGATGTGAT GACCCGCCGC CCTGCCGCTT TAAGTGGTGG CCAACAGCAA CGCGTTGCCG TTGCGCGAGC ATTAGCAGCA GGGCCTCGTC TTGTATTGGC CGATGAGCCA ACCGCCAATT TAGATTCTGA AAATGCTTTT GCTTTGCTGG ATATCATGCA CCGTTTATCC CATGAAGAAA AAACAACTTT TCTCTTTTCC ACGCACGATC AACGAGTCAT GGAACGGGCT GAGCGAATCA TCACATTAAA AGATGGTTCG ATTGAAAATG ACCAACAAAT TAACACCGCT CCGCATGAAT AG
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Protein sequence | MVLLNLHNIG KSYHQGELEV SALKDINLKI QEGEFAALVG PSGSGKTTLL NIIGGLDIPS TGSIQIHETD LKTLSESELS DFRLFQLGFI FQAYNLVPVL NALENVELVM VLQGRPKIER RERAEHYLGL VGLQDVMTRR PAALSGGQQQ RVAVARALAA GPRLVLADEP TANLDSENAF ALLDIMHRLS HEEKTTFLFS THDQRVMERA ERIITLKDGS IENDQQINTA PHE
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