| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0375 |
|---|
| Symbol | |
|---|
| ID | 3762322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 423473 |
|---|
| End bp | 424939 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637785084 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390645 |
|---|
| Protein GI | 78484720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTT TATTTTCAGA TTCGAGAAAA CCAGATGAAT GCGTTGCAAG CTATCTCATT
AGAACGGCTG AAAATAACGG CTTCAGAAGA GTCAGTCATC TTTTAAACCA TACAGATTTG
CACTGGAAAA ATAGCCGTTT ACCAATTCCC ACTATTCTTT CTGGAAAAGT CGAAGTAGAC
ACGCTACTTT CGCAACTTGG ATTAGAGCCT ATTGGTAAGA CTAAGTTATC TGAATTTCAT
GATTTATTCC GAAAAATTAC AGACACGCCA AAAATACTTT CAAAACACCC AAAAGTATGT
CCGTTATGCC TTAAAGAAAA TGGTTATGCG AAAGAATCAT GGAACCTACT TCCAGTAACA
GCATGTACTA AACACAAAAT AATGCTGATT GACTCCAATA ATAACGGTCG AATGCTTAGC
TGGTATCGCC CTTATTTGGG CTTCTTTGAC CATAAACAGC CAATTAAGAA AATCATAAAA
GCCCCAACAG CTTTAATTGA ACTCAGCAAA CTCTTTGAAC GGTTTTTAGA TAATCCATCT
GCAAGATGTA AAGCCAATCC TGTTCTTTTC AAAGGACTAA CTGCGAATGA GTGCCTGAGC
ATATTAAATT TTATAGCTCA CTTTCAGGCT AAAGCAGAGG GAGAATCACT GCTGATGACT
CAGAATAATC TTTCCATTGC TTCTCAATAT CAAAAGGCCT ATTCACTTAT TAAAAAATGG
CCTGACCAAT TCCACGTACT ACTATCAACT TTCGCTAGCA ATCCCATGAC AGCTTTGGAG
TCTCAAGGCA TTCGAAAACA TTTCAGAACT CTACATGACC AGTTGCATCT CCAACGAGAA
AACAAAGGTA TTGTACGAAT GAAAGAAGAA TTTGAACGAT ATTTATTATC AAATTGGCCT
ACAGCATTAA ACGAAAGTAG ATTAAAAAGA ATCTCGATTA AAGCAGTTGA AAAACAACAA
CTAAGCATCA CGGAAGCCTG CAAACTATTG AACCGTCGAA TACCTAAAGT ATCTCATCTA
GTTCAAATAG GAATTCTTAC AGAACATGAG TTTAGGGGTA AAAAATATTA CGAGCGTACT
GAGTTAGAGC AATACCTAAA AACAGTAGCC GAAAACTGGA ATTTTCAACA AACCTGTCTG
GAATTAAACG TATCGAAATC AACGATATTA AGGCTAATTG ACGCTAAATT CATACATGCC
ATCATAAAAC CATCCAAACA TAACAGAGAC TGGCTAATAG ATAAGAAAGA AACTATAGCG
TTAATCTCCA AACTCAAACG TAACGCATGT TCTGAAGACA ATCTAACAAA ATGCTATAGC
CTTCAAGGAT TCCTTAAACT TGGAAACACA TATGAAGATA CACTCTCAAT GATGCTTGAA
AGGCAATTGA CCTACAAATT CAATAAAGAT ACCGCCAAAC CAAACGGGTT GCATCAGTTT
GTGCAATTTC AACTTCAAAT CATTTAG
|
|---|
| Protein sequence | MKLLFSDSRK PDECVASYLI RTAENNGFRR VSHLLNHTDL HWKNSRLPIP TILSGKVEVD
TLLSQLGLEP IGKTKLSEFH DLFRKITDTP KILSKHPKVC PLCLKENGYA KESWNLLPVT
ACTKHKIMLI DSNNNGRMLS WYRPYLGFFD HKQPIKKIIK APTALIELSK LFERFLDNPS
ARCKANPVLF KGLTANECLS ILNFIAHFQA KAEGESLLMT QNNLSIASQY QKAYSLIKKW
PDQFHVLLST FASNPMTALE SQGIRKHFRT LHDQLHLQRE NKGIVRMKEE FERYLLSNWP
TALNESRLKR ISIKAVEKQQ LSITEACKLL NRRIPKVSHL VQIGILTEHE FRGKKYYERT
ELEQYLKTVA ENWNFQQTCL ELNVSKSTIL RLIDAKFIHA IIKPSKHNRD WLIDKKETIA
LISKLKRNAC SEDNLTKCYS LQGFLKLGNT YEDTLSMMLE RQLTYKFNKD TAKPNGLHQF
VQFQLQII
|
|---|
| |