| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0252 |
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| Symbol | |
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| ID | 3761517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 303763 |
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| End bp | 304977 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637784957 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_390522 |
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| Protein GI | 78484597 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGTT TTGAATATCA AGCACTGACG TCAAGTGGCC AAACCCAAAA AGGAACACAG
GAAGGCGAGT CGGCGAGACA GGTTCGTCAA CAGCTTCGCG ACCAAGGGCT AACACCCTTG
GAGGTCACAC CTGTGGTGGA TCGTCGTAAA GCCTTGCCAT CCCTACACTG GTTGACGCCG
AACATTCCCA TTGCGGATTT ATCTTTAATG ACACGTCAGA TATTTACGTT GTTAGGGGCA
GGAATGCCTA TGGCAGATGC CTTGCGTTCG GTGGCGAATC AAGCCGAAAA CAAACTGATG
AAACGCTTTG CAACGGGCAT TTTTGAAAAA GTATCGGAAG GACATTCCTA TGCTCAAGCG
TTAACCAGCT CGGGGTTTAA TTTACCCAGA GACTATGTGG CCACGGTTCG AGCAGGGGAA
GAAAGCGGTC ACTTGGTCGA AGTTCTGTCT CGAATGGCGG AATCGATCGA GAAACAAGAA
AAAATCCGCA AAAAAATGCG ATCGGCTTTG ATTTATCCAA CCTTGATGGT GGTCATGGCC
GTTGCCATTA TTTTGTTTTT GATGGCCTTT GTGGTTCCTA AAGTCGTGTC GGTATTTGAT
AATATGAACC AAAACTTACC ACCTTTAACG CAAGGTTTGT TGAACACCAG TGATTTTTTG
GATCAACACT GGGGATGGCT GTTGTTAGGA AGTATCGGCC TGATTGTGGT TTATAAAATG
TTAATGCAAA AAGAAAGATG GCAATATCGA CGAGATCGGG CGTTGTTATC GATCCCCGCA
TTGAGAAAGT TTTTGGTGTA TTCTGCGAGT GCCCGTTGGG CGAGAACACT TGGTGTCTTA
CATGCCAGTG GTGTGCCGAT TACAGAGGCA TTGAAAATTT CGTCAGAAGT GATGAATTTA
TTACCCATAA AGCAAAAAGT GGCGCAAATG GAAGTCGAAG TTCGAGAGGG TCAAAAACTG
TATACCAGTA TGAAACAAGC CAAGTTCTTT CCCCCCTTGT TGTTGAACTT AGTAGAAACA
GGTGAAGGAA ATGGTCAGGT CGACAATATG TTGCTGAAAG GTGCAGAGCA TTACGAGGAA
GAAGTCGATA CGGCGGCAAC AACGTTAGTC AGTCTGCTTG AACCCATTAT GATTGTGATT
ATGGGTGGAG TGGTTCTGAC GATTGTGTTG GCGATTATGC TTCCGATTTT TCAAATGAAT
AGTATGGTAG GGTAA
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| Protein sequence | MPSFEYQALT SSGQTQKGTQ EGESARQVRQ QLRDQGLTPL EVTPVVDRRK ALPSLHWLTP
NIPIADLSLM TRQIFTLLGA GMPMADALRS VANQAENKLM KRFATGIFEK VSEGHSYAQA
LTSSGFNLPR DYVATVRAGE ESGHLVEVLS RMAESIEKQE KIRKKMRSAL IYPTLMVVMA
VAIILFLMAF VVPKVVSVFD NMNQNLPPLT QGLLNTSDFL DQHWGWLLLG SIGLIVVYKM
LMQKERWQYR RDRALLSIPA LRKFLVYSAS ARWARTLGVL HASGVPITEA LKISSEVMNL
LPIKQKVAQM EVEVREGQKL YTSMKQAKFF PPLLLNLVET GEGNGQVDNM LLKGAEHYEE
EVDTAATTLV SLLEPIMIVI MGGVVLTIVL AIMLPIFQMN SMVG
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