| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_3340 |
|---|
| Symbol | |
|---|
| ID | 9169866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 3914777 |
|---|
| End bp | 3915601 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | collagen triple helix repeat-containing protein |
|---|
| Protein accession | YP_003653923 |
|---|
| Protein GI | 296271291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.623984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCC GTGACATAAC ACGAGTAATC CCGAACAAGC CTAAAAACGT CCTTCACATT
GGCCACAAGG CCATGTCTCT CTTCTCTAGC CTCTCTTCTC GGAAGGGATA TCTCGTGATC
GTCAGGTCGC CGGGAGGCCG GCGCACAGTC AAGATCGTCA CGGTGGGCGC GCTCGCCGCA
GCCTTGGTCA CGGTGGGAGG CGTGGCCACG GCGTCGTCGG CCGCCAGCTC CAGCAACATC
GTCTACGCGT GCGTGGCCAA GAAGACGGGC TACGTGCGCA TCGTCAAGAA GACCACGACC
TGCAAGCCGA CCGAGTACAA GACCTACTGG AACAAGACCG GTCCCCAGGG GCCGGCGGGC
ATCGGCGCCA AGGGTGAGAA GGGCGACCCG GGCCCGCGCG GTCCGCAGGG TCCTCAGGGT
CCCCAGGGGC CGCAGGGCCC TAAGGGCGAG AAGGGCGATC CCGGCCCGCA GGGCCCGCAG
GGCCCCAAGG GCGAGAAGGG TGACCGCGGC CCGCAGGGTC CTCAGGGTCC GCAGGGGCCG
AAGGGCGAGA AGGGTGACCC CGGCCCGCAG GGCCCGCCCG GACGGGACGG CGTCGCCACC
ATCACCTACA AGTCCGCGTC GTTCAAGTTC GGGCTGGTCG GCGGCTCCAA GACCCTGCAG
TGCGGTAACG GGCTGTACGC CACGGGCGGC GGCTTCTCCG GCACCTCGGT CGTCGGCGAG
GTCACCACGA GCGCCCCGGT CATCAGCGGC GGCAAGCCGG TCGGCTGGGA GATCAGGGGC
ACGAGCGTCG AAGGCACCAT GTACGTGATC TGCGTCGGCA ACTGA
|
|---|
| Protein sequence | MHIRDITRVI PNKPKNVLHI GHKAMSLFSS LSSRKGYLVI VRSPGGRRTV KIVTVGALAA
ALVTVGGVAT ASSAASSSNI VYACVAKKTG YVRIVKKTTT CKPTEYKTYW NKTGPQGPAG
IGAKGEKGDP GPRGPQGPQG PQGPQGPKGE KGDPGPQGPQ GPKGEKGDRG PQGPQGPQGP
KGEKGDPGPQ GPPGRDGVAT ITYKSASFKF GLVGGSKTLQ CGNGLYATGG GFSGTSVVGE
VTTSAPVISG GKPVGWEIRG TSVEGTMYVI CVGN
|
|---|
| |