Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbis_1083 |
Symbol | |
ID | 9167573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobispora bispora DSM 43833 |
Kingdom | Bacteria |
Replicon accession | NC_014165 |
Strand | - |
Start bp | 1228796 |
End bp | 1230055 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003651698 |
Protein GI | 296269066 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00426043 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00242262 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGATCC GGGAGGTCCG CGTCACCCCG GTGGCGTTCC GCGACCCGCC GCTGCTCAAC GCCGCCGGCG TGCACCAGCC ATGGGCGCTG CGCACCATCG TCGAGGTGGT CACCGACGAG GGCATCACCG GCCTGGGCGA GACCTACGGC GACCTCGCCC ACCTCGAGCA GGTCCGCGCC GCCGCCGCGC GGCTCCCCGG GCTCGACGTC TACGCGCTGC ACCGCATCTA CCGGCGGGTG GCCGACGTGG TCGGCGCGAA CATCGTCACC GACATGCACG GGCTCACCGG CTCCTCCAGC CGGGTGAAGA CCGTCGACCG GGTCTTCGCC GCGTTCGAGG TCGCCTGCCT CGACATCCAG GGCAAGGCGG CCGGGCGGCC CGTGGCCGAC CTGCTCGGCG GCAAGGTCAG GGACGCGGTG CCGTACAGCG CCTACCTCTT CTACAAGTGG GCCGGCCACC CCGGGAAGCC CGAGGACCGC TTCGGCCCCG CGCTCGACCC CGACGGGATC GTCGCCCAGG CCCGCCTGCT CATCGGCGAG TACGGCTTCC GCTCCATCAA GCTCAAGGGC GGGGTGTTCC CGCCCGAGCA GGAGGCCGAG GCGATCCAGG CCCTCCGGGA CGCGTTCCCC GGCCTCCCCC TGCGGCTGGA CCCGAACGCC GCCTGGACGG TGGAGACCTC GATCCGGGTG GGCCGCGCGC TCGACGGCGT GCTCGAGTAC CTGGAGGACC CCACCCCGGG GATCGACGGC ATGGCCCGGG TCGCGGCCGA GGTGCCCATG CCGCTCGCCA CGAACATGTG CGTGGTCACC CCCGAGCACC TGCCCGCGGC CGTGGAGCGG AGGCCGATCG GGGTGCTGCT CATCGACCAC CACTACTGGG GCGGGCTGGT GCGCTCCGCG CACATCGCCA CGCTGTGCGC CACGTTCGGC ATCGAGCTGT CGATGCACTC GAACTCGCAC CTGGGGATCA GCCTCGCCGC CATGACCCAC CTCGCCGCCG CCACCCCGGC GATCACCCAC GCCTGCGACA CGCACACCCC GTGGCAGGAC GGGCAGGACG TGGTCGCGCC GGGCGCGCTG CGGTTCGTCG ACGGCGCCGT CCCCGTGCCG GACGGGCCCG GGCTGGGCGT GGAGCTCGAC CGCGACGCGC TCGCCGTCAT GCACGAGCAG TACGAGCGCT GTGGCATCCG CACCCGGGAC GACGAAGGAT ACATGCGGAG CTTCGATCCG AGCTTTTCCA CCCGGAGAGG ATTCTGGTGA
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Protein sequence | MLIREVRVTP VAFRDPPLLN AAGVHQPWAL RTIVEVVTDE GITGLGETYG DLAHLEQVRA AAARLPGLDV YALHRIYRRV ADVVGANIVT DMHGLTGSSS RVKTVDRVFA AFEVACLDIQ GKAAGRPVAD LLGGKVRDAV PYSAYLFYKW AGHPGKPEDR FGPALDPDGI VAQARLLIGE YGFRSIKLKG GVFPPEQEAE AIQALRDAFP GLPLRLDPNA AWTVETSIRV GRALDGVLEY LEDPTPGIDG MARVAAEVPM PLATNMCVVT PEHLPAAVER RPIGVLLIDH HYWGGLVRSA HIATLCATFG IELSMHSNSH LGISLAAMTH LAAATPAITH ACDTHTPWQD GQDVVAPGAL RFVDGAVPVP DGPGLGVELD RDALAVMHEQ YERCGIRTRD DEGYMRSFDP SFSTRRGFW
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