Gene Tbd_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2748 
Symbol 
ID3672814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2827308 
End bp2828240 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID637711456 
Productputative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis 
Protein accessionYP_316506 
Protein GI74318766 
COG category[R] General function prediction only 
COG ID[COG4261] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.252016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGGATCTGGC CGCTCGCGTC GAGTGGGCGC GACGTGGCGA GCGCAGCAAC 
ATGGCGATGC TGCGGATCAT GACGTGGATT TCGCTGCGCC TCGGGCGACG CGTCGCGCGC
GTCGTGCTGC GCGGCATCAG CGTTTATTTT CTGCTCTTCG CGCACGCCGC GCGGCGCGCG
TCGCGCATCT ATCTGGCACG CGCGCTCGGC CGGCCGCCGA CGCTGCGTGA CGTGTTCCGC
CATTTCCACA GCTTTGCCGC GTGCATCCAC GACCGCGTCT ACCTCCTCAA CGACCGCTTC
GATCTGTTCG AGATCGAAAT CCACGGCCGC GAGGCGATCG ACGCCGTGCT CGCGCAGGGG
CGCGGCGCCT TCCTGATGGG TGCACACCTC GGCAGCTTCG AGGTCCTGCG CGCGGCCGGC
CGCCACCAGG CCGGGCTGCG CGTCGCGATG GTCATGTACG AAGACAACGC CCGCAAGATC
AACCGCGCGC TCGCGGCGAT CAACCCGGCC GCAGTGCGGG ATGTGATCCC GCTCGGCCGG
CTCGACTCGA TGTTGCAGGT CGAAGCCGCG CTCGACGCCG GTGGCGTGCT CGGCATGCTC
GGCGACCGCT CGCTCGACGC CGGCGCGACG CTCGCGCTGC CGTTTCTCGG ACACAGCGCC
GAATTCCCGC TCGGCGCGAT GCGGCTCGCC GCGGTGCTCA AGCGTCCGGT CCTGCTCATG
GCCGGGCTTT ATCTGGGCGG CAACCGCTAC GCGATCCATT TCGAGCCGCT CGCCGATTTC
ACCGCGCTCG CACGCGCCGA CCGCGAGCGC GCCGTGAACC GGGCGGTCGC CGACTACGCC
GCCTGCCTCG AGCGGCACTG CCGCGCGGCG CCCTACAACT GGTTCAATTT CTTCGATTTC
TGGCGGCCGC CCGCCGAGCG AGGCCGCGCA TGA
 
Protein sequence
MSTPDLAARV EWARRGERSN MAMLRIMTWI SLRLGRRVAR VVLRGISVYF LLFAHAARRA 
SRIYLARALG RPPTLRDVFR HFHSFAACIH DRVYLLNDRF DLFEIEIHGR EAIDAVLAQG
RGAFLMGAHL GSFEVLRAAG RHQAGLRVAM VMYEDNARKI NRALAAINPA AVRDVIPLGR
LDSMLQVEAA LDAGGVLGML GDRSLDAGAT LALPFLGHSA EFPLGAMRLA AVLKRPVLLM
AGLYLGGNRY AIHFEPLADF TALARADRER AVNRAVADYA ACLERHCRAA PYNWFNFFDF
WRPPAERGRA