Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2740 |
Symbol | |
ID | 3672806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2821011 |
End bp | 2823080 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637711448 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_316498 |
Protein GI | 74318758 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0201437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAC ACGCCAACGA CGCAAGGGCG GTTGCCACGC ACGCGGCCGC GAGTCACGTG CACCCGTCGC CGCATGGGGG CGGCGCGCAC GCCGGGCACG GCGTCGCGCA TGGCGGCCAC GCCGATCACG CGCGCATGGT CAGCGACTTC AGGACCCGCT TCTGGGTCGC GCTCGTGCTG ACGCTGCCCA TTCTGGCCTT GTCGGCCGAC CTCTGGGACA TGCTCGGCCT TGCCGCCCCG CTGCGCTTTC GCGGCGATCG CTACGTTCTG TTCCTGTTTT CCAGCGTCGT CTACTTCTAC GGCGGCTGGC CGTTCCTCCG CGGCTTCGGC GACGAACTGC GGCAACGCAG GCCCGGCATG ATGACGCTGA TCGCGGTGGC GATCAGCGCG GCCTACTTCT ATTCGAGCGC GGTGACCTTC GGCCTGCCGG GCATGGGCTT CTATTGGGAG CTCGCGACCC TGATCGACAT CATGCTGCTC GGCCACTGGA TCGAAATGAA GTCGGTGCTC GGCGCGTCGG GGGCGCTCGA GGCGCTGGTG CGGTTGCTGC CCGCCCAGGC GCACCGCCTC GGGCCGGAAG GGCAAAGCGA GGACATCCCG GTCGGCGACA TCGCGCCCGG CGACCGCATC CTGGTCAAGC CCGGCGAACG CGTGCCGACC GACGGCATCA TCGTCGCGGG CGAGACGAGC CTCGACGAAT CGATGCTGAC GGGCGAGTCG AAGCCGGTCG AGAAAGGCGA TGGCGCCGAA GCGATCGGCG GCTCGGTCAA CGGCGCCGGT GCGATCACGC TCGAGGTCCG CAAAACCGGC GGCCAGACCT ATCTGTCGCA GGTCATGGAC CTGGTGCGCC GCGCGCAGGA ATCGCGCTCG CGCACCCAGG ACCTGGCCAA CCGCGCTGCG CAGTGGCTGA CCGCGATCGC GCTCGGCGGC GGCCTCGCGA CGCTGTTCGC GTGGCTCGCG CTCGGCCGTG ACTTCGCCTT CGCGATGGAG CGCGCAGTCA CGGTGATGGT GATCGCCTGT CCGCACGCGC TCGGCCTGGC CGTGCCGCTC GTCGTCGCGG TGAGCACGAG CATGTCGGCC TCGCACGGCC TGCTCGTCCG GGACCGTGCG GCGTTCGAGC GCGCGCGCAA GCTCGACGCA GTCGTCTTCG ACAAGACCGG CACGCTGACC GAAGGCCGCT TCGGCGTCGC CGACATAGTG CTGCTGGCGG ACCTCGACGA AGCCGCCGCG CTGCGTCTGG CCGCGGCGCT CGAGAGCCAG TCCGAGCACC CGATCGCGGC GGGCATCGTG CGCGCGGCGA AGGAGCGCGG GCTCGCATGG CCGCCGGCCG ACGCTTTCCG CAACCTCACC GGCCGCGGTG CGCAGGCCAC GGTCGAGGGC CGCGACGTCA AGGTCGTGAG TCCGGGCTAC CTCCGCGAAC ACGGCATCGC GGCGCGCGAT GCGCGGCTCG ATGCGCTCGC CGCAGCGGGC AAGACCACGG TCTTCCTCGT CGTCGACGGA AGCGCGGTCG CGGCGTTCGG ACTCGCCGAC GTCGTCCGCG CCGAGTCGAA GGCGGCGGTC GCGCGGCTCA AGGCGATGGG CATGCAATGC ATGATGCTGA CCGGCGACTC GCGTGCGGTC GCGCAGACCG TCGCCGCGCA GCTCGGCCTC GACGACTATT TCGCCGAAGT GCTGCCCGAG CAGAAAGCCG AAAAGATCCG CGAGGTGAAG GCCCGTGGAC TCACCGTCGC GATGGTCGGC GATGGTGTCA ACGACGCGCC GGCGCTCGTC GAATCGGATC TCGGCGTCGC GATCGGCGCC GGCACCGACG TGGCGATCGA GGCCGCGGAC ATCGTGCTCG TGAGCAACGA CCCGCGCGAC GTCGCCGCGA TCCTTGGCCT GTCGCGCAAG ACCTACGCGA AGATGATCCA GAACCTGCTC TGGGCGACCG GCTACAACAG CTTCGCGATT CCGCTCGCGG CCGGGGTCGG CGCCGCCTGG GGCCTGCTGC TCACGCCTGC GGTCGGGGCC GTGTTCATGT CGGCGAGCAC CGTGATCGTC GCGATCAACG CCAAGTTACT ACGGCCCTGA
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Protein sequence | MDEHANDARA VATHAAASHV HPSPHGGGAH AGHGVAHGGH ADHARMVSDF RTRFWVALVL TLPILALSAD LWDMLGLAAP LRFRGDRYVL FLFSSVVYFY GGWPFLRGFG DELRQRRPGM MTLIAVAISA AYFYSSAVTF GLPGMGFYWE LATLIDIMLL GHWIEMKSVL GASGALEALV RLLPAQAHRL GPEGQSEDIP VGDIAPGDRI LVKPGERVPT DGIIVAGETS LDESMLTGES KPVEKGDGAE AIGGSVNGAG AITLEVRKTG GQTYLSQVMD LVRRAQESRS RTQDLANRAA QWLTAIALGG GLATLFAWLA LGRDFAFAME RAVTVMVIAC PHALGLAVPL VVAVSTSMSA SHGLLVRDRA AFERARKLDA VVFDKTGTLT EGRFGVADIV LLADLDEAAA LRLAAALESQ SEHPIAAGIV RAAKERGLAW PPADAFRNLT GRGAQATVEG RDVKVVSPGY LREHGIAARD ARLDALAAAG KTTVFLVVDG SAVAAFGLAD VVRAESKAAV ARLKAMGMQC MMLTGDSRAV AQTVAAQLGL DDYFAEVLPE QKAEKIREVK ARGLTVAMVG DGVNDAPALV ESDLGVAIGA GTDVAIEAAD IVLVSNDPRD VAAILGLSRK TYAKMIQNLL WATGYNSFAI PLAAGVGAAW GLLLTPAVGA VFMSASTVIV AINAKLLRP
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