Gene Tbd_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2529 
Symbol 
ID3671848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2599359 
End bp2600168 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content67% 
IMG OID637711235 
Producthypothetical protein 
Protein accessionYP_316287 
Protein GI74318547 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.277757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.376043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC GCGACACGCG AGTCAAGCCG GGCAGCCGTG TCAGCCTCGC CGACTGGCAT 
ACCGACGGCG ACGCGTTCGT CGGCAAGGAC AAGGCGGCAT CGATGGCGCG CCTCGACGAC
GACCGGGTGC GGCTCGAGGA ATTGCAGGAG CTTCTGTATG CCGAAGGCAA GCATCGCTTG
CTCGTCGTGC TGCAGGCGAT GGACACGGCC GGCAAGGATT CGACGATACG TCACGTGTTC
CGCGGCGTCG ATCCGCTTGG CGTCCGGGTG GCGAATTTCG GCGTGCCGAG CACGCACGAG
CTCAGGCACG ACTATCTCTG GCGCGTGCAT CCCCACGTTC CCGCTTCCGG CGAGATCGCC
ATCTTCAACC GCTCCCACTA CGAGGACGTG CTCGTGCCGC GCGTCAACGG CGCGATCGGC
CACGCCGAGT GCGAGCGCCG CTACCGTCAG ATCAACGACT TCGAACGCAT GCTGAGCGAA
ACGGGCACGA CGATCCGCAA GTTCTACCTG CACATTTCAA AGGACGAGCA GAAGAAGCGC
CTCGAAGCGC GGCGCGACAC GCCGAAAAAG CGCTGGAAGT TCCAGCCCGG CGACCTCGCC
GTGCGCGCGC AGTGGGACGA TTACCGGGCG GCCTACGACG CTCTGCTGTC CGCGACGAGC
ACGCGCCACG CCCCCTGGCA CGTGGTCCCC GCCGACGACA AGCTCGCGCG CAACCTGATC
GTCTCGGCGC TGCTGATCGA GGCCCTGGAG GGCCTCGACA TGCGGTATCC CGAACCGGTC
GCCGGCGTTG CCGGGACACC GATCATCTGA
 
Protein sequence
MKPRDTRVKP GSRVSLADWH TDGDAFVGKD KAASMARLDD DRVRLEELQE LLYAEGKHRL 
LVVLQAMDTA GKDSTIRHVF RGVDPLGVRV ANFGVPSTHE LRHDYLWRVH PHVPASGEIA
IFNRSHYEDV LVPRVNGAIG HAECERRYRQ INDFERMLSE TGTTIRKFYL HISKDEQKKR
LEARRDTPKK RWKFQPGDLA VRAQWDDYRA AYDALLSATS TRHAPWHVVP ADDKLARNLI
VSALLIEALE GLDMRYPEPV AGVAGTPII