Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2387 |
Symbol | |
ID | 3672979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2458278 |
End bp | 2459975 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637711092 |
Product | DNA primase |
Protein accession | YP_316145 |
Protein GI | 74318405 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.38837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCGC GCGATTTCAT CGATACCCTG CTGAGCCGCG TCGACATTGT CGACGTGATT GACCGACGGG TTCCCCTCAA GAAAGCCGGC CAGAACTACC AGGCCTGCTG CCCCTTTCAC AGCGAAAAGA CGCCGTCCTT CACGGTCAGT CCCAGCAAGC AGTTCTACCA CTGCTTCGGT TGCGGCGCCC ACGGCACCGC GCTCGGCTTC CTAATGGAAT ACGAGCACAT GAGCTTTCCC GACTCCGTCG CCGCGCTTGC CGAGGACGCG GGCCTGCCGA TGCCGGAATC GAGCCTCGAA CCCGAGCGTC CGAAACCACC GCCAGCGCTG TGGGACGCGC TAGAACAAGC GGCACGCTTC TACAAGCAGC AACTCAAGCA GGCACCGCAT GCGATCGACT ACCTCAAGCA GCGCGGCCTG AGCGGCGCCA TCGCCGCGCG CTACGGTATC GGTTACGCTC CCGACGGATC GCCGCTCAAA CGCGTTTTCG CCGACTACGA CGCAGAGGCG CTCGCCGCCT CGGGACTGGT CGTCGACAAC GAAGGCCGAC GCTACGACCG CTTCCGCGAC CGCATCATGT TTCCCATCCG CAACGTCAAG GGTCAGATCG TCGGCTTCGG CGGCCGGGTG CTCGGGCAGG GCGAGCCGAA ATACCTGAAC TCCCCGGAAA CGCCGCTGTT TCACAAAGGC TCGGAAATCT ACGGGCTGTT CGAAGCGCGT GCCGCGATCA AGCGCGCGGC GCGGGTCGTC GTCGTCGAGG GCTATATGGA CGTCGTGGCG CTCGCGCAGC ACGGCGTCGA ATTCGCCGTC GCGACGCTCG GCACGGCGAC GACGCCCGTC CACGCGCGCA CGCTTCTGCG CCATAGCGAC CGGCTTGTCT ACGCCTTCGA TGGCGACGCC GCCGGGCGCA AGGCCGCGTG GCGGGCGCTG GAAAACAGCC TCGAAGCGCT GCAGGACGGC AAGGAAGTCA GCTTCCTGTT CCTGCCTGAA GGCGAGGATC CGGACAGCTA CATCCGCGAC CACGGCTGCG ACGCCTTTCT GCGACTCCTC GACAATGAAA CCTTGCCCTT GTCGGCGTTC CTGATGCGCG AACTCGCGCG CGGCCGACGA CTCGACACTC AGGAAGGCCA GGCGACCCTG TTGAAGGACG CCAAGCCGCT GCTGGAAAAA ATCGGCGCAC CGCTGCTCGC ACGCCTCATT CAGCGTCAAA TCGCGGAGTT GACGCAACTT CAGGTCGGCG ATCTCAGCGC AATGGGCCTG CGACCGGTCG CGTCCCGCCC GCTTCCGCCG CGCCAACAAC GCCGCATCGC CCCTTCGCGC CTCCGGGGTT TGGCACGCAT TCTGCTAATG AATCCGCAGC GGGCAAGCGA AGTCGAGCCG CTTTGGTTCG ATGCGCGCGA TCCGCTCCAT GCGACGGCAG GCGAACTGAT CGCCTGGCTG CGCGAAGTGG GGCCGCTCAG GCTGCACACA TTGGCGGAAG CCGCGAAGGG CAGCGGCATG GAAGACTTCG TCAATGAACT GATGGTCGAT TTACTCGACA AAGATGACAC CTGGGACTGG AACGCGGAGT TCGAAGGTGC CGTCCAACAA CTACGCGACG ACTGGCGCCG CCGCCGGGTG CAGGAATTGG CGGCCCGTCC GCTCGCCAGC CTGTCGGTCG AAGAGCGCCG CGAACTGGGT GACTTGGCAC GCTCGTAG
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Protein sequence | MIPRDFIDTL LSRVDIVDVI DRRVPLKKAG QNYQACCPFH SEKTPSFTVS PSKQFYHCFG CGAHGTALGF LMEYEHMSFP DSVAALAEDA GLPMPESSLE PERPKPPPAL WDALEQAARF YKQQLKQAPH AIDYLKQRGL SGAIAARYGI GYAPDGSPLK RVFADYDAEA LAASGLVVDN EGRRYDRFRD RIMFPIRNVK GQIVGFGGRV LGQGEPKYLN SPETPLFHKG SEIYGLFEAR AAIKRAARVV VVEGYMDVVA LAQHGVEFAV ATLGTATTPV HARTLLRHSD RLVYAFDGDA AGRKAAWRAL ENSLEALQDG KEVSFLFLPE GEDPDSYIRD HGCDAFLRLL DNETLPLSAF LMRELARGRR LDTQEGQATL LKDAKPLLEK IGAPLLARLI QRQIAELTQL QVGDLSAMGL RPVASRPLPP RQQRRIAPSR LRGLARILLM NPQRASEVEP LWFDARDPLH ATAGELIAWL REVGPLRLHT LAEAAKGSGM EDFVNELMVD LLDKDDTWDW NAEFEGAVQQ LRDDWRRRRV QELAARPLAS LSVEERRELG DLARS
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