Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2320 |
Symbol | |
ID | 3673448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2394864 |
End bp | 2396009 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637711025 |
Product | secretion protein HlyD |
Protein accession | YP_316078 |
Protein GI | 74318338 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC GCATTCTTGT GTCGATCGTC GTGCTGGCGC TGCTCGCTGC GGTCGTTTAT CGCGTCCAGC AGCAAGGCGC GGGCGAGCGC CGCGGCAGCG GCGACCGCGC GCTCGCCGTG CGCGCGGTCC CGGTCGAAGA GCGCGATTTC CCGCGTGTCC TCGATCTTCC CGGCACGCTC GAAGCCGCGC AACAGGTCGC GATCGTCGCT CAGGTCGGCG GCACCGTGCT GCGGCAACAC GTCGAGGAGG GCGACGCGGT CGCCGCGGGC AAGATCCTCT TTACGCTCGA CGCACGCCCG GCGCGCGCGC GCATCGCGCA GAGCCAGGCC ACCCTCGCCG GTGCGCTCGC CGAGGCCGAG GAGGCCGAAC GCCAGCTCCG TCGCCTCGAC CCGCTGATGG CCTCCGGCTA CATCAGCCGC CAGGAATACG AGACCGCACG CGTCGCGCTC GAGGCGGCAC GGGCGCGCGC GGGCGCGGCC CGCGGCGAGC TCGAGGCCGC CCGGCTCGAC GTCGCATACG CCGCGATACG CGCACCGATC GCCGGCCGCG TCGGACGGAT ATCCGTGCGG CCGGGCAGCC TCGTGCAGGC GGGCGGCGAA CCGTTGACGA CGCTAATCGC GCCCGGGACG CTCGACGTGC GGGCGAGCGT CGCCCAGCAG GACTGGCCCG AACTCGCGGC CGCCCGGGAG CAGGGGCGCG TCACCGCCGA AGTCTTCCTC GACACCCATC CGGGCGCGCG CGCCCGTGGC GAGCTCGTCT TCGTCGACAC GCAGATCGAC GCGCCGACCG GCGCCGTGCC GATCAAGGTC AGGCTCGCCG ACCCGCCGCT CGGCCTGCTG TCGGGCCAGA GCGTGCGCGT GCGCCTGCTT CTCGGCAGCG ATCCCGGTGC CCGGGTCGTT CCCGAGGCCG CGCTGCAGCA CGGGCAGGCG GGCAGCTACG TCTACGTCGT GCGCGGGGGC AAGGCCGTCG TCCAGCCGGT GACCTCGGTG CGCAGCCTCG ACGGCGAACA CATGGTCGAG GGCGAGCTGC GTGCCGGCGA ATCCGTGCTC ACCGAAATCC CCCAGCGGCT CAAGGCCGGC GACGCGGTCA GGCTCGAGCC CGCGGCGGGC GCCGGTGCCC GGACCGGAAC GGCGCGTCCG CGGTGA
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Protein sequence | MKLRILVSIV VLALLAAVVY RVQQQGAGER RGSGDRALAV RAVPVEERDF PRVLDLPGTL EAAQQVAIVA QVGGTVLRQH VEEGDAVAAG KILFTLDARP ARARIAQSQA TLAGALAEAE EAERQLRRLD PLMASGYISR QEYETARVAL EAARARAGAA RGELEAARLD VAYAAIRAPI AGRVGRISVR PGSLVQAGGE PLTTLIAPGT LDVRASVAQQ DWPELAAARE QGRVTAEVFL DTHPGARARG ELVFVDTQID APTGAVPIKV RLADPPLGLL SGQSVRVRLL LGSDPGARVV PEAALQHGQA GSYVYVVRGG KAVVQPVTSV RSLDGEHMVE GELRAGESVL TEIPQRLKAG DAVRLEPAAG AGARTGTARP R
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