Gene Tbd_2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2147 
Symbol 
ID3671928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2234492 
End bp2235022 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content63% 
IMG OID637710851 
Producthypothetical protein 
Protein accessionYP_315905 
Protein GI74318165 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.257138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.566997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTCA TAGACCCCGA TGCCGATCTG GAATTCGATC CCGATTCCGT CTACGACGGC 
CCGAGCAAGA GCCAGAAAAA ACGCGAGGTC GAGGCCTTGC AGGATCTCGG CAACGAACTC
GTCAAGCTGC CCGACGCGCA GTTCAAGCGC ATCGAATTGC CGGAGGAATT GCGCGAAGCG
GTCGCCGCGT GTCGGAAGAT CACGCAGAAC AGCGCGCTCA GGCGGCAACG GCAATATATC
GGCAAGCTCA TGCGCGGCAT CGATCCTGCG CCGATCCAGG CGCAGCTCGA CGCGTTCAAG
GGCGTCTCCG CAACCGAGAA CGCCAAGCTC CATCAGGCCG AGAAGTGGCG CGACAGGCTG
ATCGCGGACA ACGAGGCGCT GACGATTTTC CTCGACAGCT ACCCCGAGAC TGACGCGACG
CGCCTGCGCC AGCTCATACG CAATGCGCGG GACGAGGCCG CGCGCAACAA GCCGCCGAAG
GCTTTCCGCG AAATCTTTCG CGTGATCCGC GAGGCCATGC AGGCGGGCTG A
 
Protein sequence
MRLIDPDADL EFDPDSVYDG PSKSQKKREV EALQDLGNEL VKLPDAQFKR IELPEELREA 
VAACRKITQN SALRRQRQYI GKLMRGIDPA PIQAQLDAFK GVSATENAKL HQAEKWRDRL
IADNEALTIF LDSYPETDAT RLRQLIRNAR DEAARNKPPK AFREIFRVIR EAMQAG