| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2017 |
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| Symbol | |
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| ID | 3672188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2106241 |
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| End bp | 2107917 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710719 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_315775 |
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| Protein GI | 74318035 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC CGCTGTTCCA GTTCAAGGGC GGCGTGCACC CGCCGGGGCA CAAGGCCGAG
TCGAACACGC GGCCGATCCA CGCGGCGCCG CTGCCGAAAA AGCTCGTCAT CCCGCTGCGT
CAGCACATCG GAAATCCGGC CAAGCCGGTC GTCAGCGTCG GTGACCACGT CAGGAAAGGC
CAGATCATCG GCGAAGCCGA CGGCTATATC TCGACGGCCG TGCACGCGTC GAGCTCGGGC
ATCGTCACGG CCGTCGACCT GCAGCCGGTT CCCCACGTCT CCGGACTCGC CGATCTCTGC
GTCACGATCG AAACCGACGG TCGCGACGAA TGGGTCGCCC GCGAGCCGCT CGATCTCGGC
GCACCGCCCG CCGAGTTGCG CATGCGCCTG CGCGATCTGG GCATCGTCGG CCTCGGCGGG
GCGGTCTTCC CGAGCGCCGT CAAGCTCGAC CCCGGCGCCG CCCAGGTCTG CCCCACGCTG
ATCATCAACG GCGGCGAATG CGAGCCGTGG ATCACCTGCG ACGACGTGCT CATGCGCCAT
TTCGCCGACG AAATCCTGCA GGGCGTGGCG GTGATGCGGC TGCTCCTCGG CAGCAGCGAA
ATCCTGATCG GCATCGAGGA CAACAAGCCC GAAGCCATCG CCGCGATGCA GGCCGCAGCC
GCCAAGCTCG ACTTCGCGGT CGAGATCGTC GCGGTGCCCG CGCGCTACCC GGCTGGCGGC
GCCAAGCAGA TGATCGAGAC GCTGACCGGC AAGCAGGTCC CGTCCGGCAA GCTGTCGACC
GACATCGGCA TCCAGGTCTT CAACGTCGGC ACCGCGCGTG CGCTCGCCCG CGCTGCCTGT
CACGGCGAAC CGCTGATCTC CCGCCTCGTG ACCGTCACGG GCCACGTGTT GCGACCACAG
AACTTCGAGG TGCTGATCGG CACGCCTATG CACACGCTCA TCACGCTCGC CGGGGAGCGC
GACGGCAATA CCGGCGTGCT CATGGGCGGA CCGATGATGG GCGTGCCGAT GCCCAACCTC
GACGTTCCGG TGGTGAAGGC CACGAACTGC GTCCTTGTGA AATCGAAGGA ACTCTTCCCG
CCGCTGCCCA AGGCCTTGCC GTGCATTCGC TGCACGCGTT GCGCCGATGC GTGCCCGGCG
GAACTGCAGC CGCAGGAACT GTTCCGTTTC GCCAAGGCCG GCGACTTCGG CCGCGCCCAG
GAATACCATC TGTTCGACTG CATCGAATGC GGCTGCTGCA GCTACGTCTG CCCGAGCCAC
ATCCCGCTCG TCGATTTCTA CCGCTACGCG AAGAGCGAAA TCTGGGCCCG CGAGAAGGAC
AAGCGCGCGT CCGATCTCGC GCGCGAGCGT CACGAGTTCC GCCAATTCCG CATCGAGCGC
GAGAAGAAGG AAAAAGCCGA GAAGCTCGCG GCGAAGGCCC AGGCCAAGCG CGCCGAACTC
GCCGCGGGCG CCGATACGGC GACTCCCGCC GCAGCCGACG CCGACGCCAA CGCCAAGAAG
GCGCTGATCG CCGCGGCGCT GGCGCGGGCG CAGGCGAAGA AGGACGAAGT CGCCCCGAAG
AACATCGACA ACCTGTCGCC CGACACCCGG CACGAGATCG AAGAGATCGA AGCGCGCCGC
GCAAAAATTC GCGAACTGGC CCGCCAGCCG CTGGAATCCG AAGAGAAGAA TTCCTGA
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| Protein sequence | MSRPLFQFKG GVHPPGHKAE SNTRPIHAAP LPKKLVIPLR QHIGNPAKPV VSVGDHVRKG
QIIGEADGYI STAVHASSSG IVTAVDLQPV PHVSGLADLC VTIETDGRDE WVAREPLDLG
APPAELRMRL RDLGIVGLGG AVFPSAVKLD PGAAQVCPTL IINGGECEPW ITCDDVLMRH
FADEILQGVA VMRLLLGSSE ILIGIEDNKP EAIAAMQAAA AKLDFAVEIV AVPARYPAGG
AKQMIETLTG KQVPSGKLST DIGIQVFNVG TARALARAAC HGEPLISRLV TVTGHVLRPQ
NFEVLIGTPM HTLITLAGER DGNTGVLMGG PMMGVPMPNL DVPVVKATNC VLVKSKELFP
PLPKALPCIR CTRCADACPA ELQPQELFRF AKAGDFGRAQ EYHLFDCIEC GCCSYVCPSH
IPLVDFYRYA KSEIWAREKD KRASDLARER HEFRQFRIER EKKEKAEKLA AKAQAKRAEL
AAGADTATPA AADADANAKK ALIAAALARA QAKKDEVAPK NIDNLSPDTR HEIEEIEARR
AKIRELARQP LESEEKNS
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