| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1945 |
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| Symbol | |
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| ID | 3674055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2038631 |
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| End bp | 2041033 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710644 |
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| Product | hypothetical protein |
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| Protein accession | YP_315703 |
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| Protein GI | 74317963 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.10863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.999924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCGC CCATTGCACA CCGCCTCGCC GCCGAGGTTG CCGCCACCCC GGCCCAGGTC
GCCGCCGCCA TCGCCCTGCT CGACGAGGGG GCGACCGTGC CCTTCATCGC GCGCTACCGC
AAGGAAGCGA CCGGCGGACT CGACGACGCG CAACTGCGCC TGCTCGAAGA CCGGCTGCGC
TACCTGCGCG AACTCGAAGC GCGCCGCGCG GCGATCATCG ATTCGGTCAA CGAGCAGGGC
AAGATGACGC CCGAGCTGCT GAGCGCGCTC TCGCTCGCGG CGGACAAGAC GCAGCTCGAA
GACCTCTATC TTCCGTACAA GCCCAAGCGA CGCACGAAGG CGCAGATCGC GCAGGAAGCC
GGCCTCGCGC CGCTGGCCGA TGCCCTGCTC GCGAACCCGC TGCTCGACCC CGAACACGAG
GCAGGCGCTT ACCTGCGCGA GCCGTTCGCA ACCGACGCGG GCGAGAATCC GGGCGTTCCC
GACACGAAGG CGGCGCTCGA CGGTGCGCGG CAAATCCTGA TGGAGCGCTT CGCCGAAGAC
GCAACGCTGC TGCAAGACCT GCGCGACTAC CTGCTCGAGC ACGGCGTCGT CGAATCGAAG
CTGCGCGAGG GCAAGGCGAG CGCGGCGGAA AAATACGCCG ACTACTTCGA CTATGCCGAG
GCGCTCGCCG CGATTCCGTC GCACCGCGCG CTCGCGCTGC TGCGCGGCCG CCGCGAGGAC
CTGCTCGACG TGCGGCTGCG CCTCGACAGC GAGGAGGAGC GTCCGGCCTG GAGCGCGCCG
CACAACCCCT GCGAGGCGCG CATCGCGCGG CGCTTCGGCA TCGCCGACCA GAACCGCCCG
GCCGACCGCT GGCTGATGGA CACGGTGCGC TTCACCTGGC GCGTGAAGAG CTTCATGCAC
CTCGAACTCG AATTGATGGG CGCGCTGCGC AGCCGCGCCG AGGCCGAAGC GATCAAGGTT
TTCGCGCGCA ACCTCAAGGA CCTGCTGCTC GCCGCGCCGG GCGGCCCGCA CGTGACAATG
GGGCTCGACC CGGGCGTGCG CACCGGCGTC AAGGTCGCCG TCGTCGACGA GACCGGCAAG
GTCGTCGACA CCGCGGTGAT CTATCCGCAT GCGCCAAAAA ACGACTGGGA CGGTTCCTTG
CACGCGCTCG GCAAACTCGC GGAGAAACAT CACGTCACGC TGATCGCGAT CGGCAACGGC
ACCGCGTCGC GCGAGACCGA CAAGCTCGCA CGCGAGCTCA TCACACTGCG CCCCGAGCTC
GGACTCACGA GCATCGTCGT ATCGGAGGCC GGCGCCTCGG TCTATTCCGC GTCGGCCTAC
GCCTCGCAGG AACTCCCCGA GCTCGACGTC TCGCTGCGCG GCGCAGTCTC GATCGCGCGC
CGGCTGCAGG ACCCGCTCGC CGAACTCGTG AAGATCGACC CCAAGTCGAT CGGCGTCGGC
CAGTACCAGC ATGACGTCAG CCAGTTCGAC CTCGCGCGCG CGCTCGACGC CGTCGTCGAG
GACTGCGTCA ACGCCGTCGG CGTCGACGTC AACACGGCCT CGGCGCCTTT GCTCGCGCGC
GTTTCCGGCC TCGGCACGAG CGTCGCGCAT GCGATCGTCG CCCACCGTGA CGCCAAGGGC
CGTTTCGCGA CGCGTGGCCA GCTGCGTGAG GTCCCGCGTC TCGGCGAGAA GACCTTCGAG
CAGGCCGCGG GCTTCCTGCG CATCGTCGGC GGCGACGACC CGCTCGACGC GTCGGCCGTC
CACCCGGAGT CCTATCCGCT GGTGCAGCGC ATCCTCGCCG ACATCAAGCA GGAACTGAAA
GCGGTCATCG GCAACGTCCA GGTGCTGAAA ACGCTCAGCG CGGCGAAATA CGCCGACGAG
AAATTCGGCA TGCCGACGAT CAGCGACATT CTCAGGGAGC TCGAGAAGCC CGGCCGCGAT
CCGCGCCCGG AATTCGCGAC CGCGGCATTC AGGGACGGCA TCGAAACCCT CGCTGACCTC
AAACCCGAGA TGGTTCTCGA AGGCGTCGTC ACCAACGTCG CCGCGTTCGG CGCCTTCGTC
GATATCGGCG TGCACCAGGA CGGCCTCGTC CACATCTCGG CCCTGTCGAA CAGCTTCGTC
AAGGACCCCC ACACCGTCGT CAAGGCCGGG CAGATCGTAA AGGTCAAGGT GCTCGAGGTC
GACGAGAAGC GCAAGCGCAT CGCGCTGACG ATGCGGCTGG GCGACGCGGC CGCAGGGAAC
ACCGCGCGGC ACGAGACCAG GCAGACGCGG CACGAGGCAG GTCAGGCGCG GCGCGGGCTG
GGGCAGGCGC CGCGCGAGGC ACGCCCCGCG CCGGGCAAAG GGTCCGGCGG CAAACCGAAT
CGCCCGACCG CGGCAGCGCC GGCGGGCGCG ATGGCCGCGG CTTTCGCCAA GCTGAAGCGG
TAA
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| Protein sequence | MLPPIAHRLA AEVAATPAQV AAAIALLDEG ATVPFIARYR KEATGGLDDA QLRLLEDRLR
YLRELEARRA AIIDSVNEQG KMTPELLSAL SLAADKTQLE DLYLPYKPKR RTKAQIAQEA
GLAPLADALL ANPLLDPEHE AGAYLREPFA TDAGENPGVP DTKAALDGAR QILMERFAED
ATLLQDLRDY LLEHGVVESK LREGKASAAE KYADYFDYAE ALAAIPSHRA LALLRGRRED
LLDVRLRLDS EEERPAWSAP HNPCEARIAR RFGIADQNRP ADRWLMDTVR FTWRVKSFMH
LELELMGALR SRAEAEAIKV FARNLKDLLL AAPGGPHVTM GLDPGVRTGV KVAVVDETGK
VVDTAVIYPH APKNDWDGSL HALGKLAEKH HVTLIAIGNG TASRETDKLA RELITLRPEL
GLTSIVVSEA GASVYSASAY ASQELPELDV SLRGAVSIAR RLQDPLAELV KIDPKSIGVG
QYQHDVSQFD LARALDAVVE DCVNAVGVDV NTASAPLLAR VSGLGTSVAH AIVAHRDAKG
RFATRGQLRE VPRLGEKTFE QAAGFLRIVG GDDPLDASAV HPESYPLVQR ILADIKQELK
AVIGNVQVLK TLSAAKYADE KFGMPTISDI LRELEKPGRD PRPEFATAAF RDGIETLADL
KPEMVLEGVV TNVAAFGAFV DIGVHQDGLV HISALSNSFV KDPHTVVKAG QIVKVKVLEV
DEKRKRIALT MRLGDAAAGN TARHETRQTR HEAGQARRGL GQAPREARPA PGKGSGGKPN
RPTAAAPAGA MAAAFAKLKR
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