| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1927 |
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| Symbol | |
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| ID | 3674037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2023227 |
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| End bp | 2023988 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637710626 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_315685 |
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| Protein GI | 74317945 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.949533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACGC TGAGCTCCGT CTCCCCGATC GATCTGCACG CGCTGCGGCT CGACGACGCG
CGGGCGCTGC TCGGCCACGC CGGCAAGCCC GGGGCTCCGG AGGCCGGCGA GGCCGCGGTC
GAATACCTCC AGCGCGTCAT CGACGAACTT TGTGAACTCT CCTTGAAGGA TCCGCTGACC
GGCCTGGGCA ACCGCCGGCA GTTTCGTGCT GCCCTCGAGC GCGCGATCGA GATCGTCGCG
CGCTCGGGGG ACTCGGTACT ACTGCTGCTG CTCGACATCG ACCACTTCAA GCAGATCAAC
GACGCCCACG GCCATCTGGT CGGCGATCAG GTGCTGCAGG CCGTTGCTCG CGCGCTCGCC
GAGTCGATCC GCCCGATGGA CACGGTCGCG CGCTACGGCG GTGAGGAATT CGCGATGATT
CTGCCCAATT GCCTGCCGGC CTGCGGGCAC GCCGTCGCCG AACGCATTCG TCACCGCATC
GAGGCGCTGT CGGTCCAGGT TGCGCCGCAC ACCGCGCTGC GGGTGACCGC GAGCATCGGC
GGCGCCTACG CGCCGCAATG GGTGAGATCG ACCGTGGATC TCTGGGTCGA ACGCGCCGAC
CAGCAGTTGT ACCGCGCGAA AGCGGACGGG CGCAATCTCG TGTTTCTCGA CCAGCCGCAG
GAAAGCGCCG TCAGCGCCGA AGAAAAAGGC CTGCTCTTCA GCCCGATCGC GGTCACCGAG
GCGCAACCGT CCGCGGAAAA TTCAGCGGGC AGCCCGGCCT GA
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| Protein sequence | MATLSSVSPI DLHALRLDDA RALLGHAGKP GAPEAGEAAV EYLQRVIDEL CELSLKDPLT
GLGNRRQFRA ALERAIEIVA RSGDSVLLLL LDIDHFKQIN DAHGHLVGDQ VLQAVARALA
ESIRPMDTVA RYGGEEFAMI LPNCLPACGH AVAERIRHRI EALSVQVAPH TALRVTASIG
GAYAPQWVRS TVDLWVERAD QQLYRAKADG RNLVFLDQPQ ESAVSAEEKG LLFSPIAVTE
AQPSAENSAG SPA
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