Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1916 |
Symbol | truA |
ID | 3674026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2011555 |
End bp | 2012337 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637710615 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_315674 |
Protein GI | 74317934 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.392139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.974239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGA TCGCGGTGGG TCTCGAATAT CGTGGCGTCG GTTTCTGCGG CTGGCAGTCG CAGCCGCAAG CCTGCGGCGT CCAGGACGCC GTGGAAAAAG CCGTGTCGGC GATCGCCGGC GAGGCGATCA CGGTCACCGC CGCCGGCCGC ACCGACACCG GCGTGCATGC GGCCTTGCAG ATCGTGCACT TCGACACGAC CTCGGTCCGC CCGCTGACCG CGTGGGTGCG CGGCGTCAAC AGCCATCTTC CCGCGGGCGT CGCCGTGTTG TGGGCGCGCG AAGTCGATGC GGAATTCCAT GCACGGTTTG CCGCTTTCGA GCGCGGCTAT CGCTACGTGC TGCTCAACCA TCCGGTGCGC CCCGGCCTCA ACGCCGGGCT CGTCGGCTGG CATCACCGGC CGCTCGACGT GGCGTGCATG AATCGGGCGG CGTCGCCGTT GATCGGACGG CACGACTTTT CCGCGTTCCG CGCAGCCGAG TGCCAGGCCC GCTCGCCGGT CAAGGAGTTG CGCCGCGCGC TGATCGAGCG GCGCGGCGAT TACCTGCTGT GCGATTTCCG CGCGGACGGT TTTCTGCACC ACATGGTGCG AAACCTCATG GGCTGTCTGG TCCAGATCGG TGCCGGCGGC CGCCCGCCCG AGTGGCTGCA CGAGGTGCTG GCCGGGCGCG ACCGCACGCG TGCCGCGCCG ACCTTCGAGG CGGCAGGACT GTACCTCACG CACATCCGGT ATCCTGCGCG CTTTGCCCTG CCGGAAAGCT CCGAACGATG GCCGTTCGCG TAA
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Protein sequence | MMRIAVGLEY RGVGFCGWQS QPQACGVQDA VEKAVSAIAG EAITVTAAGR TDTGVHAALQ IVHFDTTSVR PLTAWVRGVN SHLPAGVAVL WAREVDAEFH ARFAAFERGY RYVLLNHPVR PGLNAGLVGW HHRPLDVACM NRAASPLIGR HDFSAFRAAE CQARSPVKEL RRALIERRGD YLLCDFRADG FLHHMVRNLM GCLVQIGAGG RPPEWLHEVL AGRDRTRAAP TFEAAGLYLT HIRYPARFAL PESSERWPFA
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