Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1800 |
Symbol | |
ID | 3671464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1902137 |
End bp | 1902766 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637710498 |
Product | hypothetical protein |
Protein accession | YP_315558 |
Protein GI | 74317818 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.444481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCG CAATTACTAA AATGGCCGCC GGACTGGTAC TCGCAGGTTT TGCCACTGTT GCAAGTGCGG TCCCGACCGC CATTACGTCG ATGACCGTTA CGGGCGGCAC ATTCTCAATG AATGGCGGCG CCGCGGACTC GTTTATCGCG GCGAATATCG ATCCCGCCTT TGACGTTGTC GGCGGGTACG GCACTGTGAA CCTCAATGCC CCGACCAGCG GCCTTTTCAA CTTCGGTGTC TTCGGCCCGG TGTCGGTGTT CACCGGTCCG GGTTCCACGA CGCCTTTCGG TGGGTCTTCG ATCGCCCCGG GCGGCCCCGT GCCGAGCGGA ACGGCCGAAC TCGGCGGCGC GCTGAACATT GACATGTCGT CTTGGACTGC TTACTGGAAC GGGAACTACT TTAACCAAGG CGCAGCAGGC GTGACCGGAA CGGTCGATGC CGCCGGTAAC TACACGATGT CTTGGACGTC GACCATTAGC GGCGGCCCCT TCGATGGCTC CACCGGCGGC TGGACGGTTA ACGGGACGCT GGCCGTTGCG CCGATTCCTG AGGCGTCGAC CTACGGCATG ATGCTCGCCG GCTTGGGTTT GGTGGGATTT GCGGTTCGTC GTCGTAAGTT GGTTGCTTGA
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Protein sequence | MKFAITKMAA GLVLAGFATV ASAVPTAITS MTVTGGTFSM NGGAADSFIA ANIDPAFDVV GGYGTVNLNA PTSGLFNFGV FGPVSVFTGP GSTTPFGGSS IAPGGPVPSG TAELGGALNI DMSSWTAYWN GNYFNQGAAG VTGTVDAAGN YTMSWTSTIS GGPFDGSTGG WTVNGTLAVA PIPEASTYGM MLAGLGLVGF AVRRRKLVA
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