| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1624 |
|---|
| Symbol | |
|---|
| ID | 3673009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1709801 |
|---|
| End bp | 1711876 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637710311 |
|---|
| Product | CheA Signal transduction histidine Kinases (STHK) |
|---|
| Protein accession | YP_315382 |
|---|
| Protein GI | 74317642 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.885628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.805041 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTG ATATGAGCCA GTTCTACCAG GTCTTTTTCG ACGAGGCCGA CGAGCTCCTC
GCCGAAATGG AGAAGCTGCT GCTGGCTCTG GACGTGGCGG CACCCGACAG CGAGGACCTC
AACGCGATCT TCCGCGCCGC GCATTCGATC AAGGGCGGCG CCGCGACCTT CGGCTTCACC
GACATCACCG AAGTCACCCA CATGCTCGAG TCCCTGCTCG ACCGCATTCG CAAGGGCGAA
ATGGCGCTGA CCGGAGAGCA CGTCGACGCC TTTCTGGTGG CGAAAGACAT CCTCGCGATG
CAGATGGAAG GCCATCACCA CGGCGCGGGC GTCGACCAGT CGTCGGTCGA TTCGGTTTGC
CAGCGGCTGA AGGCCCTGTC CCAGGGGATT CTTGCCGAGG TGCCGGTGAT CGAGACGGTG
GCGCAGCCGC CTGCGGAGGT CCCCCCGCCG TCCGCCGCGC CTGTGGCGGA CGCCGACGGA
AACTACCGTT TCCGGATCGA AATGCCCGAG GTGCCGCAGC GCGACGTCGA CGCGCTCGCC
GTCGAACTCG GCCTGCTCGG CACCGTCACG CAGGAGACGC TGGCCGACAA GCGGGTCGCC
TTTACCCTCG TCACGAGCGA AGGCGTCGAC AGCATCGTCG CGATCTGTTC CTTCGTGCTC
GACCCGGACG ATCTCAAGAT CACCCATGGC AGCAGCGAGC CCGCGCCGGC TGCGCCTGCT
GCTGCGGCGA CGGCCGACGC CGATCCGGGC TACGGAATTT TCGAAGAGGC CAAGACCGAG
GCGCCCGCGG TGGCGCCGGG GTCTGCCGCT GCGTCGTCTG CCAGTGTGGA GGCTGGTGAG
GCCAGAACTC CCGCTCGGCG CGCGACCGAC AAGGAGGGCG TCAGCGCCGA ATCTTCATCG
ATCCGCGTTG GCGTCGAAAA AGTCGACCAG CTGATCAACC TGGTCGGCGA ACTCGTCATC
ACCCAGGCCA TGATCGAGCA GCGCATCAAC GCGCTCGATC CCATCGTCCA CGAGCGACTG
CTCAACAGCG CGAGCCAGCT CGCCCGTAAC ACCCGGGACC TGCAGGAAGC GGTGATGTCG
ATCCGCATGA TGCCGATGGA CTATGTGTTC TCGCGCTTCC CGCGCATGGT GCGCGACCTG
GCGGCCAAGC TCGGCAAGAA GGTCGAGTTC GCCACGCGCG GCGCCGCGAC CGAACTCGAC
AAGGGCCTGA TCGAGCGCAT CGTCGACCCG CTGACCCATC TCGTCCGCAA TAGCGTCGAC
CACGGCATCG AGATGCCCGA AAAACGGCGC GCGAGCGGCA AGAACGAAAG CGGCAAGCTG
ACCCTGTCGG CGGCCCATCA AGGCGGCAAC ATCGTCATCG AGGTGACCGA CGACGGCGGC
GGCCTCAATC GCGAAAAGAT ACTCGCCAAG GCCCGGCAGC AAGGTATTCC GGTGTCCGAC
GCGATGCCCG ACAGCGAAGT CTGGCAGCTC ATTTTTGCCC CCGGATTTTC CACGGCCGAA
TTCGTGACCG ACGTCTCGGG ACGCGGCGTC GGCATGGACG TCGTCAAGCG CAATATCACG
GCGATGGGCG GCAACGTCGA AATCCAGTCG GTGCCCGGTA CCGGCACGAC GATCGCGATT
TCGTTGCCGC TCACGCTCGC GATCCTCGAT GGCATGTCGG TGAAGGTCGG CGACGAGGTC
TATATCCTGC CGCTCGGCTA CGTCATCGAG TCCCTTCAGC CGGCGGCCGC CGACGTGAAG
GAAATCGCCG GCCAGGGCAA GGTCGTCAAG GTGCGCGAAG AGTATCTGCC GCTGATTCCG
CTCTACCAGA TCTTCGCGAT CGAGCCGAGC TTCGACGACG CCGCGCGCGG CATCATCGTC
ATTCTCGAAT CCGAAGGCAA GAAAGCGGCG CTGCTCGTCG ACAGCTTGGT CGGCCAGCAG
CAGGTCGTGG TCAAGAACCT CGAATCGAAC TTCCGCAGGG TGGCGGGCAT TTCCGGCGCC
ACCATCCTTG GCGACGGCGG TGTTTCGCTG ATCCTCGACG TCTCTGCGCT GCTGCGTTCC
AGCCACCAGC TCAACGCGGA TCCCATTTAT TCCTGA
|
|---|
| Protein sequence | MTIDMSQFYQ VFFDEADELL AEMEKLLLAL DVAAPDSEDL NAIFRAAHSI KGGAATFGFT
DITEVTHMLE SLLDRIRKGE MALTGEHVDA FLVAKDILAM QMEGHHHGAG VDQSSVDSVC
QRLKALSQGI LAEVPVIETV AQPPAEVPPP SAAPVADADG NYRFRIEMPE VPQRDVDALA
VELGLLGTVT QETLADKRVA FTLVTSEGVD SIVAICSFVL DPDDLKITHG SSEPAPAAPA
AAATADADPG YGIFEEAKTE APAVAPGSAA ASSASVEAGE ARTPARRATD KEGVSAESSS
IRVGVEKVDQ LINLVGELVI TQAMIEQRIN ALDPIVHERL LNSASQLARN TRDLQEAVMS
IRMMPMDYVF SRFPRMVRDL AAKLGKKVEF ATRGAATELD KGLIERIVDP LTHLVRNSVD
HGIEMPEKRR ASGKNESGKL TLSAAHQGGN IVIEVTDDGG GLNREKILAK ARQQGIPVSD
AMPDSEVWQL IFAPGFSTAE FVTDVSGRGV GMDVVKRNIT AMGGNVEIQS VPGTGTTIAI
SLPLTLAILD GMSVKVGDEV YILPLGYVIE SLQPAAADVK EIAGQGKVVK VREEYLPLIP
LYQIFAIEPS FDDAARGIIV ILESEGKKAA LLVDSLVGQQ QVVVKNLESN FRRVAGISGA
TILGDGGVSL ILDVSALLRS SHQLNADPIY S
|
|---|
| |