| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1622 |
|---|
| Symbol | |
|---|
| ID | 3673007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1707478 |
|---|
| End bp | 1709196 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637710309 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_315380 |
|---|
| Protein GI | 74317640 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.415216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGT TAGCGAACCT GAGCATCAAG TCACGGCTGG TCTTCGTGAT CGGTTTTTTA
TCCATTCTGC TGACCGCCAT TGGAGGGCTT GGCCTTGTCA GCCTCAGCGC CACGAATGGG
TCGCTTAAAA CCGTCTATGA AGACAGGGTT GTCGGGCTGG GGCACCTGGA GCGCATCAAC
GCGCTGATGA ACGGCAGCCA GATCATCGTC GGCGAGGCCG TCGCCGGCCA GCTCTCGGCA
TTCCCGGACG ATTCCGCGGT CGTTGACCAA CGCGTCAACG ACATCAAAAA CACAATCACG
GAAATCGACG GCATCTGGAA GACCTTCCTC GCCTCGCACC TGAGCTCCGA AGAAAAGGCG
CTCGCGGACG CATTCAGCGC GAGCCGACAG AAGTATGGGC GCGAGGGCGT GGTTCCCGTG
CTTGCCGCGT TGAGCGCGCA CGACTTTCAG CAAGCCGGCG AAATTCTGCA GGGGCCGATG
AGAGAGACCT ACCCGGCCGT GCGGGCCAAC GCGGAAGCCC TCATCGCGTC TCAGCTCAAG
CTCGCCCAGT CGGAGTTTGC GGCCGCACAG TCGCGCTTCG TCATGGTGCG CAATATTTCG
GTATTCGCGA TCGTCGCCGG CGTGCTACTC GCCGGCTTGA CTGGCGTGTG GCTAGTACGC
GCGATCACGC GTCCTTTGAA CCAAGCGGTG CGCATTGCGG AAAGCGTCGC AGCGGGCGAC
CTCACGCAGA AAATCGAAGT GCAGAGCCAG GACGAAACCG GCCAGTTGAT GCAGGCCCTG
AAGGACATGA ACGTGAGCCT CGCGGATATC GTCGGCCAAG TCCGCCACGG CACCGACACC
ATCGCCGTCG CCTCGCGCGA GATCGCCTCG GGCAACGCCG ACCTCTCCTC GCGCACCGAA
TCGCAGGCCT CGAGCCTCGA AGAGACCGCG AGCTCGATGG AAGAACTGAC CAGCACCGTA
CGGCAGAACG CCGAGAACGC CCGCCAGGCC AACCAGCTCG TCGTCTCCAC CGCCGACGTC
GCCGTCAAGG GTGGCGAAGT CGTCGGCCAG GTCGTCGACA CCATGGCCTC CATCAAGGAC
AGCTCGCGGA AGATCTCCGA CATCATCGGC GTCATCGACG GCATCGCCTT CCAGACCAAC
ATCCTTGCGC TCAACGCCGC CGTCGAAGCG GCGCGTGCCG GCGAGCAGGG CAGGGGCTTC
GCCGTCGTCG CCAGCGAAGT CAGGAATCTT GCCCAGCGCA GCGCCGGTGC CGCCAAGGAA
ATCAAGTCCC TGATCGAAGA CTCCGTCGGC AAGGTCGACG CCGGCAGCAA GCTCGTCGAC
GAAGCCGGCA AGACCATGGA CGAGATCGTC AGCTCGGTCA AACGCGTCAC CGACATCATG
AGCGAGATCG CCGCCGCGAG CCAGGAGCAG AGCGCCGGGA TCGAGCAGGT CAACCAGGCC
GTCGGCCAGA TGGACGAGAT GACCCAGCAG AACGCGGCCT TGGTCGAAGA GGCGGCCGCT
GCCGCCGAGA GCCTGCAGGA GCAGGCGGCC AAGCTCGCCG ACGCGGTCAG CGTGTTCAGA
CTCGACGGTG CATACGCGCA GCGCCGGGAA GTTCCGGTGT CGGCCCCGCG CGTCGCCCCG
TTGCCGACCC GTCCGCGTCC TGCCTCCGTG CCGGCCGCAC GCCCGAAGAA GCTGGCAGCC
GCCCAAGGCA ACGACGGCGG CGATTGGGAA GAGTTCTAG
|
|---|
| Protein sequence | MEMLANLSIK SRLVFVIGFL SILLTAIGGL GLVSLSATNG SLKTVYEDRV VGLGHLERIN
ALMNGSQIIV GEAVAGQLSA FPDDSAVVDQ RVNDIKNTIT EIDGIWKTFL ASHLSSEEKA
LADAFSASRQ KYGREGVVPV LAALSAHDFQ QAGEILQGPM RETYPAVRAN AEALIASQLK
LAQSEFAAAQ SRFVMVRNIS VFAIVAGVLL AGLTGVWLVR AITRPLNQAV RIAESVAAGD
LTQKIEVQSQ DETGQLMQAL KDMNVSLADI VGQVRHGTDT IAVASREIAS GNADLSSRTE
SQASSLEETA SSMEELTSTV RQNAENARQA NQLVVSTADV AVKGGEVVGQ VVDTMASIKD
SSRKISDIIG VIDGIAFQTN ILALNAAVEA ARAGEQGRGF AVVASEVRNL AQRSAGAAKE
IKSLIEDSVG KVDAGSKLVD EAGKTMDEIV SSVKRVTDIM SEIAAASQEQ SAGIEQVNQA
VGQMDEMTQQ NAALVEEAAA AAESLQEQAA KLADAVSVFR LDGAYAQRRE VPVSAPRVAP
LPTRPRPASV PAARPKKLAA AQGNDGGDWE EF
|
|---|
| |