Gene Tbd_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1516 
Symbol 
ID3671995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1603840 
End bp1604202 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content59% 
IMG OID637710201 
Producthypothetical protein 
Protein accessionYP_315274 
Protein GI74317534 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.314298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC CGAGCGAGCG CAAAACCATC CCGATTCAGG ACATCAACGA GGCGAGCAAG 
TGCGCAGGCT CCGAGCCCTA CGCGCTGATG GTGCTTGGGG ATTCGATGAT GCCGGAGTTC
GAGGAAGGGG AAATCATCGT CGTCGAGCCA TCCGGGCTCG TCAAGGACGG CTCCTATGTC
GTGGCCTACG TCAACGACGA ATACATCTTC CGCCAGATCG TGAAGCGCGA CGACGGCTGG
ATGCTGAAAC CCGTCAATCC GCTCTACGAG AACATTCCGG TCGACGATCT CGACGTCGCC
AAGGGCGTCG TCATCATGAA GAAGAAGCCC GGCCGCCGTA GCGAGCAGAA GCGCTACATT
TGA
 
Protein sequence
MSEPSERKTI PIQDINEASK CAGSEPYALM VLGDSMMPEF EEGEIIVVEP SGLVKDGSYV 
VAYVNDEYIF RQIVKRDDGW MLKPVNPLYE NIPVDDLDVA KGVVIMKKKP GRRSEQKRYI