Gene Tbd_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1342 
Symbol 
ID3672443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1424272 
End bp1424688 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content56% 
IMG OID637710027 
Producthypothetical protein 
Protein accessionYP_315100 
Protein GI74317360 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0252295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTTCTC TGCTGGGAAG AATGACGGCC GACGACCAGA AACCGATCGT GCCGACGGAT 
TGGCTATTCG CGATACGCAA AGGTTTCTCT TCCCGAGCCT TGGACTCGTT CGGCCAAAAT
ATCAATGCGA CGGATGCAGA GCTAGCAAAA ATGCTTGGCC TTTCGGTAAG GACATTGGCG
CGGCGCCGGC GTATGCTAAT TCTCACCCCC AACGAGTCCG ACCGGCTATA CCGATTAGCA
CGGGTGGTCG TACGTGCCGG GGACGTTTTC GATCATCGAG CTAACGGTCT CGTCTGGTTG
AGATCCCCAA ACGCCGCTCT CGGCGGGCTG ACCCCTATGT CAATGCTCGA TACGGACATC
GGGACGGAGA TTGTTAAAGA CCTGCTCGGC AGGATCGAAT ACGGCGTATT TTCCTAA
 
Protein sequence
MASLLGRMTA DDQKPIVPTD WLFAIRKGFS SRALDSFGQN INATDAELAK MLGLSVRTLA 
RRRRMLILTP NESDRLYRLA RVVVRAGDVF DHRANGLVWL RSPNAALGGL TPMSMLDTDI
GTEIVKDLLG RIEYGVFS