| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1053 |
|---|
| Symbol | |
|---|
| ID | 3673746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1117726 |
|---|
| End bp | 1118268 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637709736 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_314811 |
|---|
| Protein GI | 74317071 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1416] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.32942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.267344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAC GATTCGTGAA AGTCCCGCCC AAGATTGCCG CGCTGGCCTT GTTCCTCGCG
CTCCCCGTTC CGTTGCATGC ATTTGCCGAA GAATTCGCGC CCTACGGCAC CGCCAAGGTC
GACATGCACG CGATGCCCGT GACCGACGTC GTGTTCGACG TCAACTACGA GGACCCGCAG
CAGTTGAACA TCCTCTACAA CTTCATCCGC AACACGCAGG CAGTCACCAA GGGCAAGGTC
GCGGTGGTGA CCCATGGCCC CGAGTTGCGC GCCTTCGCCA AGGAGAATTA CGCGAAATAT
CAGGGCATCG TCGACAAGAT GGCGGAGCTC GCGCAGGACG GCGTCGAATT CAAGATGTGC
AGCAACGCGA TGAAAGCGGC CGGTTTCCGC GCCGAGGACA TGCACGGCTT CATCACGGTC
GTTCCCGCGG GCTTCCCGGA GATCGCCTAC TACCAGGCCA AGGGCTACCA GTACATCAAC
CCGATTCCGC TGCCGGTCAA GGACGTGCGC TATCTCGACC AGTCGCAGCT CAAGAAACAG
TAG
|
|---|
| Protein sequence | MEKRFVKVPP KIAALALFLA LPVPLHAFAE EFAPYGTAKV DMHAMPVTDV VFDVNYEDPQ
QLNILYNFIR NTQAVTKGKV AVVTHGPELR AFAKENYAKY QGIVDKMAEL AQDGVEFKMC
SNAMKAAGFR AEDMHGFITV VPAGFPEIAY YQAKGYQYIN PIPLPVKDVR YLDQSQLKKQ
|
|---|
| |