| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0925 |
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| Symbol | |
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| ID | 3672716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 979890 |
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| End bp | 983039 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637709604 |
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| Product | adenine specific DNA methyltransferase |
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| Protein accession | YP_314683 |
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| Protein GI | 74316943 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4889] Predicted helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00490448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.369503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAA TCAGTGACTT TCTTTCCAGA GTTCAGTCCG TCTCCAAAAC CGGCGCGGCG
ACCGAACACT CCTACCGCCC TGCCCTTGAG GCACTATTCA ATAGCTTAGA TGAGGCAGTG
AATGCTCTGA ACGAGCCCAA ACGCGTTGAG TGCGGCGCGC CCGATTTCAT TATTCAGCGC
GGCGAAATTG CCATCGGCCA CGTTGAGGCA AAAGACCTTA ACGTCGGCTT GCGCGGCATG
AAAAACGCGA ACAAGGAGCA GCAAGACCGC TACCGGAAAG CTCTTCCAAA CCTGATTTAC
ACAAACTGTC TTGACTGGGA TTTCTACCGG AATGGCGAGC TAATCGCGTC AGTCACAATT
GCTGACTACC TGATGGGAAT CCAGCCGAAC CCAGACCGGT TCGACATGCT GGAAAATCTA
CTTCGGGACT TTATTGCGCA GCGCCCGCAA ACCATCACCT CACCACGTGT GCTTGCCGAA
ATGATGGCGG GCAAGGCCGG GCTAATAAAA GACATATTGC GCAATGCCCT GACCGCTGAC
AAAGACTCGA AAACCGAGCT GGCAGGCCAA TACAGCGCTT TCCGCGAACA TCTTATCCAT
GACATCGAAC CCGCGGAATT CGCTGACATT TACGCGGAAA CCATCGCTTA TGGCATGTTC
GCTGGGCGCC TGCATGACAA GACACTTGAG ACCTTCAGTC GCCAGGAAGC GCTGGAGTTG
CTACCCAAAT CCAACCCATT CCTCCGCAGT CTCTTTGGTT ACATCGCGGG GCCAGACCTT
GATGAGCGGA TCAAGTGGAT CATCGACGAT CTTGCCAACG TCTTTCAGGC CGCAAACGTC
AAGAAACTCA TGGAAGGCTT CGGCAAGCTA ACTGGCCGGA ATGATCCATT CCTGCATTTC
TACGAAACCT TCCTATCCGC TTACAACCCC GAAAAGCGCA AGGCGCGTGG CGTTTGGTAC
ACCCCCGAGC CGGTAGTTAA CTTCATCGTC CGCGCAGTCG ACAACGTGCT GCAAACCGAA
TTCGGACTTG CGGATGGCCT CGCCGACACC TCCAAGGTCA CTATTGATTG GGACACGGGG
CAAGCCGACC GCAAGGGTAA GCCGGTCATG ACTCGCAAAG AGGTGCACCG GGTTCAAATT
CTCGACCCTG CTACCGGCAC TGGCACCTTC CTGGCTGAGG TCATCAAGCA GGTTGCCCCC
AAGGTAAAAG GCGTGGCTGA GGGAATGTGG TCGCAATACA TCGAGCGTGA CTTGATCCCC
CGTCTGCATG GCTTCGAGCT GCTAATGGCC TCGTACGCCA TGTGTCACAT GAAGCTCGAC
ATGATTCTGA CTGAGTTGGG CTACAAGCCT ACCGGCGCCC CGCCCCGCCT TGGCGTTTAC
TTAACCAATT CACTGGAGGA AGGCGAACGC GATGTGCGCG ACCTTTTCAT GGCGCAGTGG
CTAACCCGTG AGGCACGCGA GGCGAGCACT ATCAAACGCC AGGCACCCAT CATGTGCGTG
ATTGGCAACC CGCCTTATTC CGGCGAAAGC GCCAACAAAG GTGAGTGGAT CATGGACCTG
ATGGACGCCT ACAAAAAGGA ACCCGGCGGG CGAGACCGAC TAAACGAACG CAACCCAAAA
TGGATCAATG ATGACTATGT GAAATTCATC CGGTTCGCCG AGCACCTCAT CCTGAAAAAT
GGCGAGGGCG TGCTGGGTTT CATCACCAAC CATGGGTACC TCGACAACCC CACCTTCCGG
GGGATGCGCT GGCACCTGCT GGATACATTC GACAAGATTT ATGTGCTCGA CCTTCACGGC
AATGCCAAGA AGAAAGAGGT CACACCGGAA GGAAAGGCCG ACAAGAACGT GTTCGACATC
CAGCAGGGTG TTGCGATCAT TATCGGGATC AAGAAGCGTG CGAACGTCAA AGGTAATAAG
CCGCTTGCTG AGGTACACCA CGCTGAGTTA TGGGGCGACC GGGCGTCGAA ATATGAAGCC
CTCTGGGCCA AGGGCCTCAC CGGGGAGCTA TGGCAAAAAC TGGAACATCG CGCGCCGCAG
TATCCGTTGA CCCGACGCGA TTATGGTCTG CAAGAGGCTT ACGATGATGG ATTTGGTCTG
CGCGAATTCA TGCCGCTGCA CGGAAACGGG GTTGTCACTA AGCGCGACAG ACTAAACATA
CATGAAACCG AGTCTGGCGT AAGGGAAGTA ATCGACGACT TTTTGACGCG AACCGAAGAA
GTGGTGCGCG CAAAATATAA GCTTCCAAAA GACGTCCGGG ATTGGCGCTA TAGCTGGGCA
CTCGACGACA TCAAGGCAAA TCACATAAGC GCGCCCATTG TACGTATCCA GTATCGGCCG
TTTGACCCTC AATATATTTT CTATTCAGGG AATGCGCGTG GATTGGTTGG ATGGCCAGTC
AAGCAAATAA TGAGACATTA TCTTGACGGT CAAAATATTG GTCTACTCGC CCCGAAAGCG
ATTAGGGATA GTCAATTCGC TCACGCGTTT GTGACCAGGG ACATCACAGA GGCGATTTTT
CTGTCTGGAA CAACCGGCTC TAACGCCATG AACTTCCCCC TGTACCTGTA CCCGACCGAA
CAGGACCTGG ACCAAACGCG CCGAGTTAAC TTCGACGCTA AGCTTTACAA GCGCCTTCAG
GCCCTTGCCA AACACCCCGA ACGGGGCGTG CCTGATGAAC TGGCTGTTTT CGACTACATA
TACGGCATCC TGCACTGCCC CGCCTACCGC AAAACGTATG CGGAATTTCT GAAACTTGAT
TTTCCCCGCA TCCCTTGGCC CGCCTCTCCT GCCGAGTTCT GGGATGTTTC CGACAAAGGC
AATCAGCTTC GTTGCCTTCA CCTGATGGAC CCGGATGCAA TTGGCCTAAC GCCCTACCCA
TTTAGGGGCG AGGGCGACTC CACGGTGGAC AAGCCTCGCT ATGAGGATGG AAAGGTCTGG
GTAAACGAAA CACAATACTT CGACACCACG CCCGAAGCTG CGTGGGGCTT TTACATCGGC
GGCTATCAGC CCGCACAGAA ATGGCTTAAG GACCGCAAGG GGCGTGCGCT GAGCTTTGAC
GATGTGAAGC ACTATCAGCG CATCCTGAAA ATTCTGTCTG AAACTGATCG GATCATGCGG
ACTATAACGA TGACAATTAA AGCTGGATAG
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| Protein sequence | MTIISDFLSR VQSVSKTGAA TEHSYRPALE ALFNSLDEAV NALNEPKRVE CGAPDFIIQR
GEIAIGHVEA KDLNVGLRGM KNANKEQQDR YRKALPNLIY TNCLDWDFYR NGELIASVTI
ADYLMGIQPN PDRFDMLENL LRDFIAQRPQ TITSPRVLAE MMAGKAGLIK DILRNALTAD
KDSKTELAGQ YSAFREHLIH DIEPAEFADI YAETIAYGMF AGRLHDKTLE TFSRQEALEL
LPKSNPFLRS LFGYIAGPDL DERIKWIIDD LANVFQAANV KKLMEGFGKL TGRNDPFLHF
YETFLSAYNP EKRKARGVWY TPEPVVNFIV RAVDNVLQTE FGLADGLADT SKVTIDWDTG
QADRKGKPVM TRKEVHRVQI LDPATGTGTF LAEVIKQVAP KVKGVAEGMW SQYIERDLIP
RLHGFELLMA SYAMCHMKLD MILTELGYKP TGAPPRLGVY LTNSLEEGER DVRDLFMAQW
LTREAREAST IKRQAPIMCV IGNPPYSGES ANKGEWIMDL MDAYKKEPGG RDRLNERNPK
WINDDYVKFI RFAEHLILKN GEGVLGFITN HGYLDNPTFR GMRWHLLDTF DKIYVLDLHG
NAKKKEVTPE GKADKNVFDI QQGVAIIIGI KKRANVKGNK PLAEVHHAEL WGDRASKYEA
LWAKGLTGEL WQKLEHRAPQ YPLTRRDYGL QEAYDDGFGL REFMPLHGNG VVTKRDRLNI
HETESGVREV IDDFLTRTEE VVRAKYKLPK DVRDWRYSWA LDDIKANHIS APIVRIQYRP
FDPQYIFYSG NARGLVGWPV KQIMRHYLDG QNIGLLAPKA IRDSQFAHAF VTRDITEAIF
LSGTTGSNAM NFPLYLYPTE QDLDQTRRVN FDAKLYKRLQ ALAKHPERGV PDELAVFDYI
YGILHCPAYR KTYAEFLKLD FPRIPWPASP AEFWDVSDKG NQLRCLHLMD PDAIGLTPYP
FRGEGDSTVD KPRYEDGKVW VNETQYFDTT PEAAWGFYIG GYQPAQKWLK DRKGRALSFD
DVKHYQRILK ILSETDRIMR TITMTIKAG
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