| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0902 |
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| Symbol | |
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| ID | 3672693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 954266 |
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| End bp | 957376 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709581 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_314660 |
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| Protein GI | 74316920 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.920503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT GGGTAATCGG ATGGTCCTTG CGGAACCGCG TCACGGTGGT TCTGCTGTAT
CTCATTCTGG CCGGCGCGGC CATCGTCGCC GCGCGCAACA TGGCCGTCGA CGTCTTCCCC
GAATACGCGC CGCCGCAGGT GCAGATCCAG ACCGAGGTGC CCGGCTATTC GGCCGGCGAC
GTCGAAACGC TGGTCACGCG CCCGATCGAA GTGGTGCTGC AGGGCGCGCC CTACGTTGAC
CAGATCCGCT CGAATTCCTC GGTCGGCCTG TCGCGCATCA CCATCGTCTT CGAGTGGGGC
GTCGACATCT ACCGCGCGCG GCAGATCATC CAGGAGCGCA TGCAGGCGGT GCAGGGCCAG
TTGCCGTCCG GCGCGCAGAC GCCGCAGCTC ATGCCGGTGA CCTCGGCCGT GAGCTGGCTG
CTCAAGTTCG CGCTCGTCGA CTGGTCGGGC GCCGACCGCG AGCACGAACT GCGCACGTTG
GTCGACTGGG ACATCCGCAA CCGGCTGCTC GCCCAGCCCG GCGTCGCCTC GGTCGTCGCC
GTGGGCGGCG GGGTCAAGCA GTACCAGGTG CTGCTCGACC CGCTGCGCAT GCGCAAATAC
GGCGTGTCGG TCGCGATGGT GGCCGACGCG CTGCGCAGCG CCAATCTGGT CGCGCCGGGC
GGCTTCGTCT ACCCGAGCGC GGAAGAGGAA TATTTCATCC GCGCCAACGG CAAGGTCGCG
AGCCTGCGCG ACGTGGCCGA GACGCTGGTG GTGATGCGCG ACGGGCAGCC GATCCACATC
GGCGACATCG CCGAGGTGCG CTTCGGCAGC GAGATCAAGC GCGGCGAGGG CCAGATCCAC
GGCGGCCCGG CGGTGATCGG CACGGTGTCC AAGCTGTGGG GCGCCGACAC CATGGAAACC
ACGCGCAACG TGGAAAAGGT GCTGGCGAGC ATGGCGCAGA ACCTGCCCGA GGACGTCGAG
CTGATTCCCC ACGTGTTCCG CCAGGCGAGC TTCATCGACG CCTCGATCGA CAACCTGCGC
GACGCCTTGC TGCATTCTTC GATCATCGTT GCGCTCGTGC TGCTGCTGTT CCTGTTCCGC
TGGCGCCCGA CCGCGATCAG CCTGATCGCG ATCCCGACTT CGCTGATGGC CGGCGTGCTC
GTGCTGTGGG CGTTCGACAT CAGCATCAAC GCGCTGACGC TCGGCGGGCT CGTGTTCGCG
ATCGGCGAGG TCGTCGACGA CGCGATCATC GACGTCGAGA ACATCCTGCG GCGCCTGCGC
GAAAATGCGC GCGCGGTCGC ACCGCTGCCC GCCCTCGACA TCGTCTACGA AGGTTCGCGC
GAAATCCGCA ACTCGGTCGT TTTCGCGACG CTCATCATCC TCGTCGCGTT CACGCCGATC
TTCTTCCTCC AGGGCATCGA GGGGCGCATC TTCCAGCCGA TGGCGATCGC CTACCTGGCC
GCCATCGCCA GTTCGCTGAT CGTCGCGATC ACGCTCGTGC CGGTGCTCAG CTATTACCTG
ATGGGTCGCG AACAGCGGGC GCGCGAATAC GGGCTGGGGC CGGTTTCCGA GTTCCTGCTC
GGGCGCTACG AGCGCCTGCT GCAGTGCCTG CTCGCGTGGC CCCTGACGGT TGCCGTGGCG
ACGCTGCTGC TCGTCGCAGC GGCCGCGATC GCCTTTGCCG GGCTCGGGCG TTCGTTCATC
CCGCCTTTTC ACGAGGGCAA TCTCGTGATC GCGACGACGA TGATGCCCGG CACCTCGCTC
GAGGAAAACC TGCGCATGGG CCGTGAGGTC GAAAGGCGGG TCGGAGAGAT GCCCGAGGTC
GCGAGCCTCG CCCAGCGTGC GGGCCGCTCC CGGCTCGACG AGGACGCGCA GCCGGTCAAC
TTCAGCGAAT TCGACATCGC GCTGAAGCCC GGCACGCGCA ACGTGCCCGA GGTCATGCAG
CGCATCCGCG AGCAGCTCGG GCAGATACCG GGCATGTCGA CCAACGTCTC GCAATTCATC
ACCCACCGCA TGTCGGAAAT CCTGTCCGGC GTGCGCTCCC AGGTCGCGGT CAAGATCTAC
GGCCCCGACC TCGCGGTGCT GCAGCAGAAA CAGCAGGCGA TCCATCAGGC CGTGCAGGGC
GTCGCCGGGG TCGTCGATCT GCAGATGGAG CCGATGATTC TGGTGCCGGG TGTGGATGTG
CAGGTCGACC GCGCTGCGGC GGCAGCCTAC GGCTTCACGC CGGGCGCCAT CGTGGCCCAG
GTCGAACAGG CCTTCAACGG CGTCGTCGCG TCGAAAGTGC TCGAGCAGGA CCGGACCTTC
GACCTCTTCC TGCGCGTCAA CGAAGCCTCG CGCGCCGACG TCCGCACGCT CGGCGAGATT
CCCCTGATCT CGCCCGAAGG CGTCGTCGTG CCGCTACGCG ACCTCGCGCG CTTCACGGTC
GTGCAGGAGC CCTACATGAT CAATCGCGAT AGCGGCGCGC GCCGCGCCGT CGTGCAGTGG
AACACCGAAG GCCGCGACCT CGACGGCGTC GTGCGCGAGG CGCAGGCGCG CATCCGCGAC
ACGGTCGAAC TGCCGCCAGG CTATGCGATC GAGATCGGCG GCGATTTCGA GGGCCAGCAG
CGCGCGACAC GCAGCCTGCT GCTCTCGGGC ACGGCCGCGC TGGTGCTGAT CACGCTGATC
ATGTTCCATG CCTTCCGCAA CTGGTCGCTC GTGATGCTGA TCATGCTCAA CCTGCCGCTT
GCGCTGATCG GCGGCGTCTT TGCGCTACTG CTGGCCGGCG AGACGCTCAA CGTCTCGTCC
ATGATCGGCA TGGTCGCGCT GTTCGGCGTG GCGACGCGCA ACAGCCTGCT GCTCGTGTCG
CGCTACCTGC ATCTGATGGA GGCCGAGCCG CAGCTCGGCG CCGCCGAGCT CGCGGTGCGC
GGCGCGCGCG ACCGCCTCGT TCCCATCCTG CTGACCGCCT TCACGGCCGC GCTGGCCGTG
ACGCCGCTGA TTTTCGGCGA CCCGACCGGA AAGGAAATGG AACGCCCGCT CGCGATCGTC
CTGCTCGGCG GCATGCTGAG CTCGACGCTG CTGAATCTCG TGGTGATTCC CACGCTGTTC
CACTGGCTGG CGGCGCGCCG GCCGGGCTGG CTTTCCCCGG GGGCGGCCTG A
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| Protein sequence | MFDWVIGWSL RNRVTVVLLY LILAGAAIVA ARNMAVDVFP EYAPPQVQIQ TEVPGYSAGD
VETLVTRPIE VVLQGAPYVD QIRSNSSVGL SRITIVFEWG VDIYRARQII QERMQAVQGQ
LPSGAQTPQL MPVTSAVSWL LKFALVDWSG ADREHELRTL VDWDIRNRLL AQPGVASVVA
VGGGVKQYQV LLDPLRMRKY GVSVAMVADA LRSANLVAPG GFVYPSAEEE YFIRANGKVA
SLRDVAETLV VMRDGQPIHI GDIAEVRFGS EIKRGEGQIH GGPAVIGTVS KLWGADTMET
TRNVEKVLAS MAQNLPEDVE LIPHVFRQAS FIDASIDNLR DALLHSSIIV ALVLLLFLFR
WRPTAISLIA IPTSLMAGVL VLWAFDISIN ALTLGGLVFA IGEVVDDAII DVENILRRLR
ENARAVAPLP ALDIVYEGSR EIRNSVVFAT LIILVAFTPI FFLQGIEGRI FQPMAIAYLA
AIASSLIVAI TLVPVLSYYL MGREQRAREY GLGPVSEFLL GRYERLLQCL LAWPLTVAVA
TLLLVAAAAI AFAGLGRSFI PPFHEGNLVI ATTMMPGTSL EENLRMGREV ERRVGEMPEV
ASLAQRAGRS RLDEDAQPVN FSEFDIALKP GTRNVPEVMQ RIREQLGQIP GMSTNVSQFI
THRMSEILSG VRSQVAVKIY GPDLAVLQQK QQAIHQAVQG VAGVVDLQME PMILVPGVDV
QVDRAAAAAY GFTPGAIVAQ VEQAFNGVVA SKVLEQDRTF DLFLRVNEAS RADVRTLGEI
PLISPEGVVV PLRDLARFTV VQEPYMINRD SGARRAVVQW NTEGRDLDGV VREAQARIRD
TVELPPGYAI EIGGDFEGQQ RATRSLLLSG TAALVLITLI MFHAFRNWSL VMLIMLNLPL
ALIGGVFALL LAGETLNVSS MIGMVALFGV ATRNSLLLVS RYLHLMEAEP QLGAAELAVR
GARDRLVPIL LTAFTAALAV TPLIFGDPTG KEMERPLAIV LLGGMLSSTL LNLVVIPTLF
HWLAARRPGW LSPGAA
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