Gene Tbd_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0840 
Symbol 
ID3673537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp890029 
End bp890502 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content71% 
IMG OID637709518 
Productputative cytochrome c5 
Protein accessionYP_314598 
Protein GI74316858 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.674138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.844917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC GAGACGTCTT GCTGGCCGCA ATGCTCGGCC TCGCGATCGG CGGGTGCAGC 
GCGCCGCCTC AGCGGGCCGG GCAGGCTACC CCTGCTCCTG ACGTCGCCGC CCCGGCCGCC
GGCAAGGCGG CGCTCAATAG CGGCGAGCAG GTCTACCGCG AGGTATGCAT GGCCTGCCAC
GCCACGGGGA TCGCCGGGGC GCCGAAGTTC GGCAATCGCG GCGACTGGGA AAAACTGATC
GCCGAGGGTC AGGCGATCGT GACCGCGCAC GGCTGGGTCG GCGTGCGCGC GATGCCGCCG
CGCGGCGGCC GGCCCGATCT CACCCAGGAA GAATTTGCCC GCGCGGTCGT CTGGATGGCA
CGCAGCGCGG GCGCCGACTG GCAGGACCCG GACGCGGCGA TGCTGCACGC GATCCACGAG
GAGGCGGAAG ACCGCCGCGA GGAACTGGAG AAGAAGGAAC ACGATGACGA CTGA
 
Protein sequence
MKERDVLLAA MLGLAIGGCS APPQRAGQAT PAPDVAAPAA GKAALNSGEQ VYREVCMACH 
ATGIAGAPKF GNRGDWEKLI AEGQAIVTAH GWVGVRAMPP RGGRPDLTQE EFARAVVWMA
RSAGADWQDP DAAMLHAIHE EAEDRREELE KKEHDDD