| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0827 |
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| Symbol | |
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| ID | 3673524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 869458 |
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| End bp | 870870 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709505 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_314585 |
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| Protein GI | 74316845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.261841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACACCA CCGTGATTCC CCAGCGCCTC GCCTTCGTCG ACCTCGAAAC CACCGGCGCC
AACGCCGCGC GTGACCGCGT GACCGAAATC GGCGTCGTCG TCGTCGACGG CGACCGGGTC
GAGACCTGGA GCACGCTCGT CAACCCCGAG CGCGCGATTC CGCAATTCAT CCAGCAGCTC
ACCGGCATCA GCAACGAGAT GGTCGCCGAC GCGCCGACCT TCGCACGCGT CGCCGACGAA
CTCGCCGAGC GGCTCGACGG GCGCCTCTTC ATCGCGCATA ACGCGCGCTT CGACTACGGC
TTTCTCAAGC ACGAATACCA GCGCCTCGGC CGCCGCTTCC GCGCCGACGT GCTGTGCACG
GTGCGCCTGT CGCGCCGGCT CTTTCCCGAA CACTACCGCC ACAACCTCGA CAGCCTGATC
GCGCGCCACG GCCTGGCAAC CGAGGGCGAC CGCCACCGTG CGCTCGCCGA CGCCGACCTG
ATCTGGCAGT TTTGGCGCAC GCTGCAGCGC GAACACGAGG CGCAGGCGCT CGCCGAGGCC
GTCGCGCACC AACTCCTGCG CCCCGCGCTG CCGCCGCACC TCGATCCCGC CCTGCTCGAA
GACCTGCCCG AGTCGCCGGG GGTGTATCTC TTCTATGGCG AAAACGACGT GCTGCTCTAC
GTCGGCAAGA GCGTCAATCT GCGCCAGCGC GTGTTCTCGC ACTTCGCGGC CGACACCCGC
GAATACAAGG CGATGCAATT GACCCAGCAG GTGCGCCGCG TCGAGTGGCG CGAAACGGTC
GGCGAACTCG GCGCGCTCTT GCTCGAATCG CGGCTCATCA AGGAAGGCGC GCCCGCACAC
AACCGGCGGC TGCGCCGCGC GTCCGAACTC TGCGCCTGGC GGCTCGACGA AGTCGCGCCC
GGCGACTTCC GCCCGGTGCT CGTGACCGCC GACGACCCGG ACTTCGGCCG CGACGGCGAC
CTCTTCGGCC CGTTCTCGAG CCGCCGCCAG GCGACGCTCG CCTTGCGCAA GATCGCCGAC
GCGCATCAAC TCTGCCCGGT CGTCCTCGGG CTCGAGAAAC CCGCGCGCCC CGACAGCCCC
TGCTTCGCCT TTCAGGTACA AAAATGCCGC GGCGCCTGCG CGGGCAAGGA GACGGCCGGC
CTTCACAGCG CCCGGCTGAT GGCCGCGCTC GCGAAAACGA AAATGAAAAG CTGGGCCTAC
CCCGGCGCGA TCGGACTCGT CGAGCGCGAC GACTTTCTCG ACGTCGAGGA AGTCCACGTC
GTGCACGCCT GGCGCTATCT GGGCACCGCG AAGAGCGAAG CCGAGATCGG CGAACTGCTC
GAACACGCGG CACGCGCGCC CTTCGATCTC GACACCTACA AGCTGCTCAA GACGCAACTC
GCCAAGTCGA AGTTCACGAT CCGCGCCCTG TAG
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| Protein sequence | MHTTVIPQRL AFVDLETTGA NAARDRVTEI GVVVVDGDRV ETWSTLVNPE RAIPQFIQQL
TGISNEMVAD APTFARVADE LAERLDGRLF IAHNARFDYG FLKHEYQRLG RRFRADVLCT
VRLSRRLFPE HYRHNLDSLI ARHGLATEGD RHRALADADL IWQFWRTLQR EHEAQALAEA
VAHQLLRPAL PPHLDPALLE DLPESPGVYL FYGENDVLLY VGKSVNLRQR VFSHFAADTR
EYKAMQLTQQ VRRVEWRETV GELGALLLES RLIKEGAPAH NRRLRRASEL CAWRLDEVAP
GDFRPVLVTA DDPDFGRDGD LFGPFSSRRQ ATLALRKIAD AHQLCPVVLG LEKPARPDSP
CFAFQVQKCR GACAGKETAG LHSARLMAAL AKTKMKSWAY PGAIGLVERD DFLDVEEVHV
VHAWRYLGTA KSEAEIGELL EHAARAPFDL DTYKLLKTQL AKSKFTIRAL
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