Gene Tbd_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0585 
Symbol 
ID3673695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp614577 
End bp615710 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content67% 
IMG OID637709256 
Producthypothetical protein 
Protein accessionYP_314343 
Protein GI74316603 
COG category[S] Function unknown 
COG ID[COG2850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.269935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.522775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGC CTCGTTCCGC CGACCCGCTC CTGGGCGGCC TCAGTCCGAC CCGCTTCCTG 
CGCGACGTCT GGCACAAACG GCCGCTCTTG ATCCGCAACG CCGTCCCCGG GTTCCAGGGT
CTGTTGTCGC CGCGCGAGAT GGAGCAACTC GCCTGCCGCG ACGACGTCGA ATCGCGCCTG
GTGCAGGGCA GCGGCAGCGA TTGGCGGCTT GCGCACGGCC CCTTCAGCAA GACCGACTTC
AAGCGCCTCC CCAAGACCGA GTGGACGCTC CTGGTCCAGT CGCTCAACCA TGTCCTGCCC
GAAGCCGACG TCTTGCTCGC GCGCTTCGAC TTCATTCCGC ACGCCCGCCT CGACGATCTG
ATGGTGAGCT ACGCGGTGCC GCGCGGCAGC GTCGGCCCGC ATTTCGATTC CTACGACGTG
TTTCTGCTGC AGGGCCAGGG GCATCGCCGC TGGCAGATCA GCACGCAAAC CGATCTCGCG
CTCGTCGACG ACGCGCCGCT CAAGATCCTG AAGCATTTCG AGGTCGCCGA CGAATGGGTG
CTCGGGCCGG GGGACATGCT CTATCTGCCG CCGCACGTGG CGCATTACGG TGTGGCCGAA
GACGCGTGCA TGACCTATTC GATCGGATTT CGCGCGCCGA CCGTCGAAGA ACTGGCGCAC
GGCTTCCTGA TGCATCTGCA GGATACGCTC AGCCTCGAGG GCCGCTACGC TGATCCCGAC
CTGCGTCTGC AACGTCATCC GGGCGAAATC GGCCGCGCGA TGCTCGATCA GATCGAGGCC
ATGATCGACC GCATCCGCTG GAGCCGCAAC GACGTCGCCG AATTCGCCGG CCGCTACCTG
TCGGAGCCGA AGCCGAACGT GTTTTTCCGG GCGCCCGACG CCCCCCTCAC GCGCCGCGCC
TTCGACCGGC GTGCGAATAG CGCCGGCGTC GCGCTCGATC CGAAGTCGCG TCTGCTGTTC
CGCGGCCGGC GTTTCTTCAT CAATGGCGAG GCGTTCACGC CGCCACGGGA CGACTTCGCC
ACGCTAACCC GACTCGCCGA TCGGCGCCGC CTCGCGCCCC CGCTGTCGAC GGCGCTCTGC
GCGCGCTTCT ATGCCTGGTA CGAAGCCGGC TGGCTGGAGA TCGACGGCGA ATGA
 
Protein sequence
MSTPRSADPL LGGLSPTRFL RDVWHKRPLL IRNAVPGFQG LLSPREMEQL ACRDDVESRL 
VQGSGSDWRL AHGPFSKTDF KRLPKTEWTL LVQSLNHVLP EADVLLARFD FIPHARLDDL
MVSYAVPRGS VGPHFDSYDV FLLQGQGHRR WQISTQTDLA LVDDAPLKIL KHFEVADEWV
LGPGDMLYLP PHVAHYGVAE DACMTYSIGF RAPTVEELAH GFLMHLQDTL SLEGRYADPD
LRLQRHPGEI GRAMLDQIEA MIDRIRWSRN DVAEFAGRYL SEPKPNVFFR APDAPLTRRA
FDRRANSAGV ALDPKSRLLF RGRRFFINGE AFTPPRDDFA TLTRLADRRR LAPPLSTALC
ARFYAWYEAG WLEIDGE