Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0499 |
Symbol | |
ID | 3673132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 519183 |
End bp | 520148 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709170 |
Product | mechanosensitive ion channel |
Protein accession | YP_314257 |
Protein GI | 74316517 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.979826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGC TAACCCAGTA TTTCCCCGAC CTCGAGACCT GGCGCGGGCC GCTCGTGAGC GTCCTGCACG TCGTGCTGAT ACTGGTCCTG GCCTGGCTCG CGCTGCGACT GTCGCGCAGG GGGCTCGCCC GTCTGCGCAT GCGCCTGCAG CAGGATCTCG ACGACTCCGA GCGCATCAAG CGCCTCAATA CGCTCGAGCA GGTCTTCCGC TACGTGCTTG CGGTGCTGAT CATCCTCGTC GCCGGCATGC TCGTGCTGTC GGAACTCGGC ATCTCGATCG CGCCGGTGCT CGCCGCCGCC GGGGTCGTCG GCATCGCGGT CGGCTTCGGC GCGCAGAGCC TGGTCAAGGA TTACTTCACC GGCCTGTTCC TGCTGCTCGA AAACCAGGTG CGCCAGGGCG ACGTCGTCGA AGTCGGCGGC AAGGGCGGGC TGGTCGAGGA GATGACGCTG CGCTACATCC GGCTGCGCGA TTACGAGGGG AGCGTGCATT ACGTGCCCAA CGGCATCATC GACACCGTCA CCAACCGCAG CCGCGGCTTT GCCTTCGCGC TGATCGACGT CAGTGTCGCC TACCGCGAGG ACGTCGACGC CGTGTGTGCG GTGATGCGCG AGGTCGCGGC CGACCTGCGT GCCGACCCGG AACTGTCGAG CAAGATCGTC GAGGACATCG AGATCGCAGG CGTCGAACAG TGGGCCGACT CGGCGGTCGT GATCCGGTGC CGCTTCAAGA CCCTGCCGCT CGAGCAGTGG AACGTGCGCC GTGCGTATCT GCAGCGGCTC AAGAAGGCCT TCGACGCGGC GGACATCGAG ATTCCGTTTC CGCATCTCAC GCTTTACCAG GGTCAGAACA AGGACGGCAG CGCGCCGCCG CTGCGCCTGG AGCGGGCGCG CGGCGGGCGG ACGGCGGAAA ATCCGCATGC TGGCGCGGCC AGGCTGACTT CGGTCAATCC CGGCACCGGG CGCTGA
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Protein sequence | MDALTQYFPD LETWRGPLVS VLHVVLILVL AWLALRLSRR GLARLRMRLQ QDLDDSERIK RLNTLEQVFR YVLAVLIILV AGMLVLSELG ISIAPVLAAA GVVGIAVGFG AQSLVKDYFT GLFLLLENQV RQGDVVEVGG KGGLVEEMTL RYIRLRDYEG SVHYVPNGII DTVTNRSRGF AFALIDVSVA YREDVDAVCA VMREVAADLR ADPELSSKIV EDIEIAGVEQ WADSAVVIRC RFKTLPLEQW NVRRAYLQRL KKAFDAADIE IPFPHLTLYQ GQNKDGSAPP LRLERARGGR TAENPHAGAA RLTSVNPGTG R
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