Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0396 |
Symbol | rplJ |
ID | 3671663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 423260 |
End bp | 423781 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637709062 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_314154 |
Protein GI | 74316414 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.252363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00709296 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAGTCTGA ATCTTGAAGA GAAGAAGGCC GTTGTTGCTG AGGTGGCTGC GCAGGTTGCG GCCGCCCAGA CGGTTGTCGT CGCCGAGTAT CGTGGCATCG CCGTGGAAGA CATGACCCAA TTGCGCGTCA AGGCGCGCAA GGAAGGCGTG TATCTGCGCG TGTTGAAGAA CACGCTGGTG CGCCGCGCGG TTGCGGATAC GCCTTTTGCG GGCATCGCCG ACCAGCTGGT CGGTCCGCTC GCCTACGGCA TTTCCAAAGA CCCCGTCGCT GCCGCGAAGG TCATGCACGA GTTTTCCAAG ACCAACGACA AGTTCGTCGT CAAGGCCGGT GCCATGCCCA ATTTCCTCAT GTCCCCCAAG GACGTCGGGA ATCTGGCCAG CATGCCCAGC CGCGAGGAAC TGTTGTCCAA GCTCCTGGGC ACCATGCAGG CGCCGATCGC GCAGTTCGTT CGCACGCTCA ACGAAGTCCC GACCAAGTTC GTTCGTGGAC TTGCCGCGGT GCGCGACAAG CAGGCCGCGT AA
|
Protein sequence | MSLNLEEKKA VVAEVAAQVA AAQTVVVAEY RGIAVEDMTQ LRVKARKEGV YLRVLKNTLV RRAVADTPFA GIADQLVGPL AYGISKDPVA AAKVMHEFSK TNDKFVVKAG AMPNFLMSPK DVGNLASMPS REELLSKLLG TMQAPIAQFV RTLNEVPTKF VRGLAAVRDK QAA
|
| |