| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0354 |
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| Symbol | |
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| ID | 3672140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 373351 |
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| End bp | 375018 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709015 |
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| Product | hemolysin activation/secretion protein |
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| Protein accession | YP_314112 |
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| Protein GI | 74316372 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0188948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGCG TGTACATGAA TGATAGGTCT GGCCGAGCGG CCGTTTGGCT GTTGTTGGGG
TTGTGTTGGG CGCCAGCGGT TGGGGCGGTC GAAACGACAC CGACCACCGC GTCGTCCTCC
GCAGTGCCGG CGTCTGCCGG CAAGGATGAT GCAGCGTCGG CGACCGCCCG GGCAGATGGT
GCGCCTCGAT TTGACGTATT CGAATACCGC GTGGAAGGCA CGACGTTGCT GCCCGCCATC
GCGATCGAGC GGGCGGTATA TCCACATTTT GGTGAGAAAA AGACGATCGC CGATGTCGAG
CAGGCGCGCG AGGCGCTGGA GAAGGCCTAC CACGGCGCCG GCTACCTGAC CGTGCTGGTG
AGCATCCCGC AGCAGAAAGT GGATGAAGGC GTCGTGCGCC TGACGGTGAC CGAGGCGCCC
GTACAGCGGC TGCGCGTCGT GGAGTCGCGC TACTTCAGCC TCGGTGAAAT CAAGGCCGGC
GTGCCGCAGC TGGCCGAGGG CACGGTGCCG AACTTTCCGC AGATGCAGAA GGAACTGGCG
GCTCTCAACA AGTCCGCGGA TCGCCGCATC ACGCCCGTGC TGCGCGCGGG CAAGACGCCG
GGGACGGTCG AGGTCGACCT CAAGGTGCAG GACCGGCTGC CGCTGCATGG CGAGGTTGAG
GTCAATGACC GCTACAGCCA GGACACGACG CGCACGCGTC TGACCGCGAG CCTGCGCTGG
GATAACGTGT GGCAGAAGCA GCATGGGCTC GGCATCACGG TGCAGACGGC GCCTGAGAAC
GTCGACGAGA GCAAAGTATT CTCGGCGAGC TACACATGGC CACTCGCGTC CGGCAACTAC
CTCGCACTGT ATGGCGTGCG GTCGGAATCC GACGTTGCCG CCGTGGGGAC GCTGAACGTG
CTCGGCAACG GCAACATTCT CGGCGCACGC TACATTATCC CGCTGCGCAG CCGCAGCGAG
GAGTTCTTCC ACACGGCGAC GCTGGGCGTG GACTACAAGG ATTTCGAGCA GTCCGTCGCG
CTGCTTGGCG GCGGCGATTT CAACACGCCG ATCCGCTACC TGCCGTTCAC GCTTGGTTGG
GACGGCACGC GGCTGGGCCA GGGGCGCAGC ACCAAGGTCG GCGTGGCATT CAATTTCCAC
GTGCGTGGGC TTGTGGCGGA CGAACAGGAG TTTGCGGACA AGCGCTTCAA GGGGCGCCCC
GACTACGCTT TTCTGCGCGG CACGTTCTCG CACGATGAGA CCTGGCCCAC AGGTTGGGGC
GCTGCGCTGC GGGGCAGCTG GCAGTTGGCG GCACAACCGC TGATTTCGAA CGAGCAATTC
GCCGTCGGCG GCGTCGATAC GGTGCGGGGC TACCTCGAAT CCGCCGCGCT GGGCGACGAC
GGCGCGGCGC TGAGCGTGCA GGCCAGCACG CCGAATCTTG CGAAGCACCT TGGCGATGCC
ATCGACGGTC TGCATGTACT GGCCTTCGTC GACGGCGGGT ACGTGCGCGT GCGCCAGCCC
ATTACAGCCG ATGACCGCCA CACGCTGGCC GGCGCGGGCC TCGGGCTGCG GCTGAAGGGA
TGGGGCGGCG CATCGGCGGG GATCGACTGG GCCGTCGCGC TGAAAGATCT CGGCGACACC
GAACGTGGCG ACAGCCGCGG CCACTTCCGC CTGGGCTACG CCTGGTGA
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| Protein sequence | MVGVYMNDRS GRAAVWLLLG LCWAPAVGAV ETTPTTASSS AVPASAGKDD AASATARADG
APRFDVFEYR VEGTTLLPAI AIERAVYPHF GEKKTIADVE QAREALEKAY HGAGYLTVLV
SIPQQKVDEG VVRLTVTEAP VQRLRVVESR YFSLGEIKAG VPQLAEGTVP NFPQMQKELA
ALNKSADRRI TPVLRAGKTP GTVEVDLKVQ DRLPLHGEVE VNDRYSQDTT RTRLTASLRW
DNVWQKQHGL GITVQTAPEN VDESKVFSAS YTWPLASGNY LALYGVRSES DVAAVGTLNV
LGNGNILGAR YIIPLRSRSE EFFHTATLGV DYKDFEQSVA LLGGGDFNTP IRYLPFTLGW
DGTRLGQGRS TKVGVAFNFH VRGLVADEQE FADKRFKGRP DYAFLRGTFS HDETWPTGWG
AALRGSWQLA AQPLISNEQF AVGGVDTVRG YLESAALGDD GAALSVQAST PNLAKHLGDA
IDGLHVLAFV DGGYVRVRQP ITADDRHTLA GAGLGLRLKG WGGASAGIDW AVALKDLGDT
ERGDSRGHFR LGYAW
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