Gene Tbd_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0301 
Symbol 
ID3672087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp323126 
End bp324055 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content72% 
IMG OID637708962 
Productglycosyltransferase 
Protein accessionYP_314059 
Protein GI74316319 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.4815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCGC GCTTTTCGGT CGTCATTCCG GCGTACAACG CCGCGGCGAC GCTCGCGCGC 
GCGATCGAAT CGGTGCGCGC GCAGAGCTGG CCCGCGCACG AGATCATCGT CGTCGACGAC
GGGTCGAGCG ACGCGACCGC GGACGTCGCT GCAGGCTTCG GCGACGACGT GCGCCTGATC
CGACAGCCGA ACCAGGGCGT CGCCGCCGCG CGCAACCGCG GCGCGCGCGA GGCCAGCGGC
GACTGGCTCG CGTTCCTCGA CGCCGACGAC TGGTACGCGC CGGACCGGCT GAGGCTGCAC
GCCGAATGGA TCGCCGAAGA CCCGACGCTC GATTTCCTGA CCGGAGACTA CGAATACCGC
GACGAGGCGG GGACACCGCT CGGAACGTCG ATGGCCCAGC ACGACGCCGG GCGCCGCATG
CTCGACAAGG CAGGCGGCGC GCGGCGCGTC GTGATGGACG CAGCGGACGA GATCGCGGCC
TTCGTCGCCG ACCATTTCGG CGATACCCAC ACGCTGTCGC TGCGTCGCGA ACGCTTCATC
GCGCTCGGCG GCTATCCCGT CGGCTTCAAG GTCTGCGAGG ACGTGCATCT GCTGACGCGT
CTGGTCGCGG TGAGCCGGCG CATCGGCGTG AGCTGCGCGT GTCTCGCCGT CTACCTGATC
CACGGCGGCA GCGCGACGCG GCGCGATCCG GTCGCGGCGC AGCGCGAGAA CGTGCGCACG
CTCGCCGACC TCGCGCGGCT CGCCGAGAAT TTCCCGCTGC CGGTGAGGCA GGGCGTGGCG
GCGCGCATGG CCGATGCGCG CTACAACCTC GGATGCGCCC TGGTCCGCGA GGGGCAGCGC
CTCGCCGCGG TCAGGGCGGT GTGGCCGTCG TTCGCGGCGC GCCCGGGCAG GCAGAGCCTG
CGCAGGCTGT TGTCGATGCT GAAAGGATGA
 
Protein sequence
MTPRFSVVIP AYNAAATLAR AIESVRAQSW PAHEIIVVDD GSSDATADVA AGFGDDVRLI 
RQPNQGVAAA RNRGAREASG DWLAFLDADD WYAPDRLRLH AEWIAEDPTL DFLTGDYEYR
DEAGTPLGTS MAQHDAGRRM LDKAGGARRV VMDAADEIAA FVADHFGDTH TLSLRRERFI
ALGGYPVGFK VCEDVHLLTR LVAVSRRIGV SCACLAVYLI HGGSATRRDP VAAQRENVRT
LADLARLAEN FPLPVRQGVA ARMADARYNL GCALVREGQR LAAVRAVWPS FAARPGRQSL
RRLLSMLKG