Gene Tbd_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0149 
Symbol 
ID3673294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp159208 
End bp159690 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content69% 
IMG OID637708810 
Productputative lipoprotein 
Protein accessionYP_313907 
Protein GI74316167 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.400959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.856742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TGCTGCGGCG CGCGCTCGCA TCTTGTCTCG TCTTTATCCT CGCGGCGTGT 
TCCGCGCTCG CGCCGAAGCC TTTGCCGCCC GAGGTGAGCG TGGCGGCGGT CGAGGTCAGA
AGCGTCGGGG TGTTCGAACA GCGGTTCGAG ATCCTGCTGC GCGTCACGAA CCCGAATGCG
TTCGCGCTCA CGATCGAGGC GCTCGAGTTC GACCTCGAGG TCAACGGGCA GCCGTTCGCA
CGCGGCCTGT CGCCGCTTCC GACGCCGCTC GGTGCCACAG CGGAAACGGA GGTCGTGATC
GAGGCGGTTA CGCGCTCGGA CGATCTGATC CGCCAGCTCG GCACGCTGGC GCGCGGACAG
CTGAAACAGG GCGTGCCGTA TCGTCTGCGC GGGCGGGTGA AGACCGACAA GTCGCCGCGC
TGGCTACCGT TCGAGCACGC CGGCGTCTAC GGTGCTCCGC GCCCGCCGGA CGGCACGATC
TGA
 
Protein sequence
MSAMLRRALA SCLVFILAAC SALAPKPLPP EVSVAAVEVR SVGVFEQRFE ILLRVTNPNA 
FALTIEALEF DLEVNGQPFA RGLSPLPTPL GATAETEVVI EAVTRSDDLI RQLGTLARGQ
LKQGVPYRLR GRVKTDKSPR WLPFEHAGVY GAPRPPDGTI