Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0149 |
Symbol | |
ID | 3673294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 159208 |
End bp | 159690 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637708810 |
Product | putative lipoprotein |
Protein accession | YP_313907 |
Protein GI | 74316167 |
COG category | [S] Function unknown |
COG ID | [COG5608] Conserved secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.400959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.856742 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA TGCTGCGGCG CGCGCTCGCA TCTTGTCTCG TCTTTATCCT CGCGGCGTGT TCCGCGCTCG CGCCGAAGCC TTTGCCGCCC GAGGTGAGCG TGGCGGCGGT CGAGGTCAGA AGCGTCGGGG TGTTCGAACA GCGGTTCGAG ATCCTGCTGC GCGTCACGAA CCCGAATGCG TTCGCGCTCA CGATCGAGGC GCTCGAGTTC GACCTCGAGG TCAACGGGCA GCCGTTCGCA CGCGGCCTGT CGCCGCTTCC GACGCCGCTC GGTGCCACAG CGGAAACGGA GGTCGTGATC GAGGCGGTTA CGCGCTCGGA CGATCTGATC CGCCAGCTCG GCACGCTGGC GCGCGGACAG CTGAAACAGG GCGTGCCGTA TCGTCTGCGC GGGCGGGTGA AGACCGACAA GTCGCCGCGC TGGCTACCGT TCGAGCACGC CGGCGTCTAC GGTGCTCCGC GCCCGCCGGA CGGCACGATC TGA
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Protein sequence | MSAMLRRALA SCLVFILAAC SALAPKPLPP EVSVAAVEVR SVGVFEQRFE ILLRVTNPNA FALTIEALEF DLEVNGQPFA RGLSPLPTPL GATAETEVVI EAVTRSDDLI RQLGTLARGQ LKQGVPYRLR GRVKTDKSPR WLPFEHAGVY GAPRPPDGTI
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