| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0070 |
|---|
| Symbol | |
|---|
| ID | 3673269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 72194 |
|---|
| End bp | 73747 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637708729 |
|---|
| Product | nitrite reductase (NO-forming) |
|---|
| Protein accession | YP_313828 |
|---|
| Protein GI | 74316088 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.532245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.428629 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACT TTTCCCGCCT CTGCATGCTT GCCGCCGCCC TGCTGGCAAG CTCGCCCGCG
TCCGCCGCCG AACCGGTGCC CGCGGTCTAC GCCCGACACT GCGCCAGCTG CCACGGCATC
GACCGCCTCG GCGGCACCGG CCCTGCGCTG CTGCCGGAAA ACCTGGAACG GCTGCGCAAA
CCCGAGGCGC TGAAAGTCAT CGCCAATGGC CGCGCCGCTT CGCAGATGAT GGCCTTCGGC
GACAAGCTCT CTGCCGCCGA GATCCAGGCG CTGACGGATT TCGTCTACAC GCCGCCCGCC
AGCGTGCCCG TCTGGGGACT CGCCGAGATC AAGGCGTCGC GCATCGAGAA TTTCAAGGCT
GGCAGCCTGC CGGACACACC CGCATTCAAG GCCGACCTGC TCAACCTCTT CGTGGTGGTG
GAAACCGGCG ACCACCACGC CACCCTCCTC GACGGCGACA GCTTCAAACC CATCCACCGC
TTCCAGACCC GCTTCGCCCT GCACGGCGGG CCGAAGTTCA CGCCCGACGG GCGCTATGTC
TATTTCGCCT CGCGCGATGG CTGGATTGCC AAGTTCGACA TCTGGAACCT CAAGATCACG
CACGAGATCC GCGCCGGCAT CAACACCCGC AACCTCGCCG TGTCGGGCGA CGGGCGTTAC
GTGATCGTCG GCAACTATCT GCCGCAGACC CTGGTCGTGC TCGATGCGGC CGACCTCACG
CCGCTCAAGC TGATCGAGGC GAAGGACGAC ACCGGCAAGC GCTCGCGCGT TTCCGCGGTC
TATGATGCGG CGCCGCGCAA GAGCTTCATC GCCGCGCTGA AGGACGTCAA GGAGGTCTGG
GAGATCCCCT ACACCGACGA GCACGAGCCG ATCTTCCCGG GGCTGGTGCA CGATTTCCGC
ATGGCCGAAG CACTCGCCGA CAAGGGGCCG TTCCCGGTCC GCCGCATCCC GCTCGACGAC
TACCTCGACG ATTTCTATTT CGACCAACCC TACCAGCACC TGATGGGCGC CTCGCGCGAG
GGCGGCAAGG GTCAGGTCGT CAACCTCGAC GCGCGCATCA AGGTCGCCGA CCTCGACATC
CCGGGCATGC CGCACCTCGG TTCCGGCATC ACCTGGGATT ACCAGGGCCG CCCGGTGATG
GCGACACCGA ACCTCAAGTC CGGCGTGATC AGCATCATCG ACATGAAGAA CTGGAAGGTG
ATCAAGCGGG TCGAAACGCT CGGCTCGGGC TTCTTCATGC GCAGCCACGA GAACACGCCC
TACGCCTGGA CCGACAATTT CATGAGCCCG GCCAAGGACA CGCTGACGAT CATCGACAAG
CGCACGCTCG AGGTCGCGCG CAACCTGACC CCGGAGCCCG GGAAGACCGC GGCGCACGTC
GAGTTCACCC GCGACGGCAG GTACGCGCTC GTCAGCATCT GGGAAATGGA CGGCGCCTTG
ATCGTCTACG ACGCGGCGAC CTTCAAGGAA GTCAAACGCC TGCCGATGAG CAAGCCCTCG
GGCAAGTACA ACGTCTACAA CAAGACGACA CGCTCGGCCG GCACGAGCCA CTGA
|
|---|
| Protein sequence | MQHFSRLCML AAALLASSPA SAAEPVPAVY ARHCASCHGI DRLGGTGPAL LPENLERLRK
PEALKVIANG RAASQMMAFG DKLSAAEIQA LTDFVYTPPA SVPVWGLAEI KASRIENFKA
GSLPDTPAFK ADLLNLFVVV ETGDHHATLL DGDSFKPIHR FQTRFALHGG PKFTPDGRYV
YFASRDGWIA KFDIWNLKIT HEIRAGINTR NLAVSGDGRY VIVGNYLPQT LVVLDAADLT
PLKLIEAKDD TGKRSRVSAV YDAAPRKSFI AALKDVKEVW EIPYTDEHEP IFPGLVHDFR
MAEALADKGP FPVRRIPLDD YLDDFYFDQP YQHLMGASRE GGKGQVVNLD ARIKVADLDI
PGMPHLGSGI TWDYQGRPVM ATPNLKSGVI SIIDMKNWKV IKRVETLGSG FFMRSHENTP
YAWTDNFMSP AKDTLTIIDK RTLEVARNLT PEPGKTAAHV EFTRDGRYAL VSIWEMDGAL
IVYDAATFKE VKRLPMSKPS GKYNVYNKTT RSAGTSH
|
|---|
| |