Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Taci_1043 |
Symbol | |
ID | 8630883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermanaerovibrio acidaminovorans DSM 6589 |
Kingdom | Bacteria |
Replicon accession | NC_013522 |
Strand | - |
Start bp | 1086989 |
End bp | 1088758 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | type II and III secretion system protein |
Protein accession | YP_003317557 |
Protein GI | 269792653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0150789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTTT CCAGGCTAAC TGATCTAATC TCATCGAGCG GCTTCAGGTC CTTTTCGCTC CTCCTTTTGG CGTTGCTGGC CTTTACCGGG CACCTGGGGG CCGCGTGGGC GGAGGTCGCC TCGTCCCAAG CCCAAGAGCA GATGGTCCCC ATGATCAGGG ACATAAAGTG CACCCAGGGG GGATCCCAGC TGGCCATCCT GGAGTTCATT GGAGCATCCG TAGCCAACCC GTCCAGGATC CAGGACGGGA GGGAGGGGCT CGAGGTCCTC TTTCCCCCCG CGGTCTCGGT GGACCAGGCC CTACCGAGGG AGATCCAGTT CGAGTACCCG CTGCTGAGTT CGGTCTCCCT TAGGACCACC GAAAAGGGGT TGTTGGTGGT CCTGTCCTCC CCGGTCCCGC TGAAGGTCAA GTCCCAGTAC GGTGGAGGCA CCAACCGGTT CGTCCTCTCC CTGGAGCCCC GGGAGCAGGC CTCCCGAATG AAGTCCGGCC GGGTGCCCAC CGTGGTCCCC AGGGCGTCGG ACGGCAAGGA CCCGCTGTCC TTGAACGTGC CGGTGGACCT GGCGCTCAGG GAAGTGGAGC TCAAGGACGT GTTCCGAATG CTGGGGGACT TCAGCGGCTA CAACATCATA TGCGATCCCA CGGTGCCCAC CAGTCCGGTG ACGCTCACGG TCCGCAAGGT GCCCATGAAG GAGGTCTTCT CCTACCTCAT GAGGACCTAC GACATAACCT ATGCGGTGAT GGGGCGGACG ATACTGGTGG GGAAGGCGGA CTCCCTGGCC AAGTCCCTGG GACAGGAGAA GACCAAGGCC TTCGAGATAT CCTACGGGGA TGTGAAGCAG ATATCCGCCC AGGTGCAGAC CCTGTTCGAG ATAACCCGTC CCATAGCGGT GGACGAGAGG CTCCGGGTCA TGTACGTGAC CGGTCGCCCG GAGCAGCTGG CGGCGGTGGA GCGGTTCCTC AACGCGGCGG ATCATCCGGG GAAGCAGGTG ATGCTCCAGG CCCGGATCGT GGAGGTCAAG GACGACGGGG TTAGGGAGCT GGAGTCGGTG GTGAACACCG TCTACCGCTA CTGGTGGCTC TCCTTCAGCA GCAAGGGCGG GGTTCTGGGC TACAGCCGGA TCAACCAGGA ATCGGTCTAC AAGAACGATA CCAACCGGGT GACCAAGCCG GGCGCCACGG ACATAAGCGC CATAGCGGAG AGCGGTGGTC TCAGCCTCTT GGACGCGGGT ATAAAGGCCC TTGAGAATGC GGACAAGGGC AAGACCCTGG CCAGCCCCTC CGTGGTGGTT GTGGACGGCA AGGAGGCCAA GATATCCCTC ACGGAGAACA TCAAGTACAT CTCCGCCCGG GACCAGGCGG GGAACCCCAC CTACTCGGAG GAGAAGGTGG GCCCCACCAT GGAGTTCCTG CCCACCGTGG GCAGGGACGG GTTCGTCACC ATAAAGATGA CCCTCAAGAC CGGGGAGGTC ACCAAGTACA TAAAGGGAGG CCTCGGGGAG GAGGTCCCCC AGACCAGCAC CCGGGAGGTC ACCTCCTACG TTCGGGTCCG GGATGGGGAG CCCTTCGTGG TTGGGGGGCT GTTCCGGGAC AGCAACACCT TCTCCGAGTA CCGGATACCG GTGCTGAGCG ACATACCCCT CATTGGCGAG CTCTTCAAGT CCAGGACCAA GAAGAAGGAG CGTGGAGAGG TGGCCATGAT AGTGATCCCC CACATCCTGG ACGTGCCGGG ATCACCGGTC AAGACGTCGG AGGTGCACCT GAGCCGCTGA
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Protein sequence | MRLSRLTDLI SSSGFRSFSL LLLALLAFTG HLGAAWAEVA SSQAQEQMVP MIRDIKCTQG GSQLAILEFI GASVANPSRI QDGREGLEVL FPPAVSVDQA LPREIQFEYP LLSSVSLRTT EKGLLVVLSS PVPLKVKSQY GGGTNRFVLS LEPREQASRM KSGRVPTVVP RASDGKDPLS LNVPVDLALR EVELKDVFRM LGDFSGYNII CDPTVPTSPV TLTVRKVPMK EVFSYLMRTY DITYAVMGRT ILVGKADSLA KSLGQEKTKA FEISYGDVKQ ISAQVQTLFE ITRPIAVDER LRVMYVTGRP EQLAAVERFL NAADHPGKQV MLQARIVEVK DDGVRELESV VNTVYRYWWL SFSSKGGVLG YSRINQESVY KNDTNRVTKP GATDISAIAE SGGLSLLDAG IKALENADKG KTLASPSVVV VDGKEAKISL TENIKYISAR DQAGNPTYSE EKVGPTMEFL PTVGRDGFVT IKMTLKTGEV TKYIKGGLGE EVPQTSTREV TSYVRVRDGE PFVVGGLFRD SNTFSEYRIP VLSDIPLIGE LFKSRTKKKE RGEVAMIVIP HILDVPGSPV KTSEVHLSR
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