| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1439 |
|---|
| Symbol | |
|---|
| ID | 6092881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1451566 |
|---|
| End bp | 1452573 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642488641 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001739466 |
|---|
| Protein GI | 170289228 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0392] Predicted integral membrane protein |
|---|
| TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA ATCTGCTTTT AGCTCTGATC ATAGGCCTCG GTGCCACGGC TCTCATGGTT
TCCTTTTGGG GCAGCGGTGA TGCGTGGAAG GAGTTGAAGA ACGTAGAACC GATCTTTTTG
ATGGTTCTTT CACTGAACTT TTTAGGTATT GTTTTAGTGG ACGCCCTCAG AACCAAGATA
CTTCTGAAAG ATGTTCCTTT CGGAACCTGT GTGGCCAACT CTCTTTGGGG ATTCTATGTG
GGGGCAATAA CACCTTTCGC TGCTGGAGGG CAACCCTTCC AGATCTACCA TCTCACGAAG
GCTGGAATTC CCTTTGAAAA ATCGGCCTCT GCGGTAGCGG TGAGGTTTTT CTCTTCTTTT
TCATTTTCCA TCATCTCCGG TTTTGTCTTC TTCATGGTCT ATCTTGATAC CTTCGAAGAA
CTCGGTATCC TCGGAGACCT TTTCTTTGCA GGAATAGTTC TGGCTTTTCT CTTCTATGTT
TTCATAATCC TCCTGTCTTT CAGTAAGGGT TTTCTGCGAA GATTCTTCAT GTCGAGACCT
GTTTTGAAGA TCTTCATGTT TTTCTCCAGA AAATCTGAAG ATGATTTGAA AAGGCTCGTG
GAGGAAAGAA TACTTGGATA CGTTTCGGCC ACCAGGGAGT TCTGGAGAGC TTCCAAACTG
AAGTTTTTAG CGGTAGCGAT TCTGTCGGGT TTGATGGTCG TGCTAATACA CACGAGTACT
TATTTTGCGA TGAAAGCCGT CAATCGTAAT GTGAATGTTT CTCTGTTCCA GGTGGTCAGT
ATCCAGCTTG CTCTCAGCCT GATTGTGTAT TTTGCTCCTA CACCCGGTGC CAGCGGTGCA
ACGGAACTGG CTTACTACGT TGTATACTCG AACATAATCG AAAAGACTGA TGCGATGGTA
TCCATGCTCG TCTGGAGATT CTTCAATTAT TATCTGTTCA TAATTTTGGG GATTCTTCTT
GGACTGGGGA GGTTAACAAA AAAACCGGAG GGAAAATCCT CCGGCTGA
|
|---|
| Protein sequence | MKKNLLLALI IGLGATALMV SFWGSGDAWK ELKNVEPIFL MVLSLNFLGI VLVDALRTKI
LLKDVPFGTC VANSLWGFYV GAITPFAAGG QPFQIYHLTK AGIPFEKSAS AVAVRFFSSF
SFSIISGFVF FMVYLDTFEE LGILGDLFFA GIVLAFLFYV FIILLSFSKG FLRRFFMSRP
VLKIFMFFSR KSEDDLKRLV EERILGYVSA TREFWRASKL KFLAVAILSG LMVVLIHTST
YFAMKAVNRN VNVSLFQVVS IQLALSLIVY FAPTPGASGA TELAYYVVYS NIIEKTDAMV
SMLVWRFFNY YLFIILGILL GLGRLTKKPE GKSSG
|
|---|
| |