Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1299 |
Symbol | |
ID | 6092740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1326329 |
End bp | 1327477 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642488500 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_001739326 |
Protein GI | 170289088 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.894732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGAGC TCAGAATACT CCACACGTCC GACTGGCACC TCGGTGTCAC CTCGTGGACC AGCTCGCGAC CAGTAGATCG ACGTGAAGAG CTGAAGAAAG CGCTCGATAA AGTAGTCGAA GAAGCCGAAA AGAGAGGGGT CGATCTGATT CTTCTAACGG GTGATCTTCT TCATTCGAGG AACAATCCTT CGGTTGTCGC TCTGCACGAT CTTCTGGATT ATCTGAAGAG GATGATGAGA ACAGCGCCTG TGGTAGTACT TCCTGGAAAC CACGACTGGA AGGGCTTGAA ACTCTTTGGA AATTTCATAA CATCGATCTC GAGTGACATA ACCTTTGTCA TGTCCTTCGA ACCTGTGGAT GTAGAAGCCA AACGGGGCCA GAAGGTGAGA ATTCTCCCCT TCCCGTATCC TGACGAGTCG GAAGCTTTGA GAAAAAACGA GGGAGACTTC CGGTTCTTCC TCGAATCCAG ACTCAACAAA CTTTACGAAG AAGCGCTGAA GAAGGAAGAT TTCGCTATCT TCATGGGTCA CTTCACTGTT GAAGGGCTCT CGGGTTATGC TGGAATCGAG CAAGGAAGAG AGATCATTAT AAACAGAGCG TTGATTCCGT CGGTGGTTGA TTACGCTGCG CTCGGGCACA TTCATAGTTT CCGAGAGATT CAGAAGCAAC CTCTCACCAT ATACCCTGGC TCTCTCATAA AGATAGATTT CGGAGAAGAA GCGGACGAAA AAGGAGCGGT CTTTGTTGAG CTGAAAAGAG GAGAACCGCC CAGGTATGAA AGAATAGACG TTGTCCCTCT TCCGTTGAAA ACTCTCTACT ACAAAAAGAT AGACACCTCT GCTCTGAGAA GCATAAGGGA TTTCTGCAGG AATTTTCCTG GTTACGTGAG GGTGGTTTAT GAAGAAGACT CCGGTATTCT TCCCGACCTG ATGGGAGAGA TAGATAATCT GGTGAAGATA GAAAGAAAGT CAAAAAGAGA GATAGAAGAG GTGCTTCGAG AAAGCATGGA AGAGTTCAAA GAAGAGCTGG ACAAAATTGA TTACTTCGAA CTCTTCAAGG AGTATTTGAA GAAGAGAGAA GAAAACCACG AAAAGCTGTT GAAAATCCTG GATGAGCTTC TCGATGAGGT GAAAAAGAGT GAGGCCTGA
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Protein sequence | MKELRILHTS DWHLGVTSWT SSRPVDRREE LKKALDKVVE EAEKRGVDLI LLTGDLLHSR NNPSVVALHD LLDYLKRMMR TAPVVVLPGN HDWKGLKLFG NFITSISSDI TFVMSFEPVD VEAKRGQKVR ILPFPYPDES EALRKNEGDF RFFLESRLNK LYEEALKKED FAIFMGHFTV EGLSGYAGIE QGREIIINRA LIPSVVDYAA LGHIHSFREI QKQPLTIYPG SLIKIDFGEE ADEKGAVFVE LKRGEPPRYE RIDVVPLPLK TLYYKKIDTS ALRSIRDFCR NFPGYVRVVY EEDSGILPDL MGEIDNLVKI ERKSKREIEE VLRESMEEFK EELDKIDYFE LFKEYLKKRE ENHEKLLKIL DELLDEVKKS EA
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