Gene TRQ2_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1000 
Symbol 
ID6092430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand- 
Start bp1044427 
End bp1045050 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID642488196 
ProductN-glycosylase/DNA lyase 
Protein accessionYP_001739033 
Protein GI170288795 
COG category[L] Replication, recombination and repair 
COG ID[COG1059] Thermostable 8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAGAAC TGCTGAAAGA ACTCGAAAGG ATACGAGAAG AAGCAAAACC GCTCGTTGAA 
CAGCGGTTCG AAGAGTTCAA AAGATTGGGC GAAGAAGGAA CAGAAGAGGA TCTCTTCTGT 
GAACTCTCTT TCTGTGTTCT CACAGCCAAC TGGAGTGCGG AAGGTGGAAT TAGAGCGCAG 
AAAGAAATCG GAAAGGGTTT TGTGCATCTT CCCCTTGAGG AACTCGCGGA AAAACTGAGA 
GAGGTTGGAC ACAGGTATCC TCAAAAGAGA GCCGAGTTCA TAGTAGAAAA CAGAAAACTG 
CTGGGAAAGT TGAAGAACCT TGTGAAGGGT GATCCTTTTC AATCCAGAGA GTTCCTAGTA 
AGAAACGCAA AGGGGATCGG CTGGAAAGAG GCGAGCCACT TTCTCAGAAA CACCGGTGTG 
GAAGACCTCG CCATTTTGGA TAAACACGTT CTGAAACTCA TGAAAAGACA CGGCCTGATT 
CAGGAGATAC CAAAAGGATG GAGTAAGAAA AGATATCTCT ACGTGGAAGA GATCCTCAGA 
AAAGTCGCCG AAGCGTTTGG AGAATCTCCC GGGAAGTTCG ATCTCTACCT GTGGTACCTT 
GTGAAGGGAA AGGTGGATAA ATAG
 
Protein sequence
MEELLKELER IREEAKPLVE QRFEEFKRLG EEGTEEDLFC ELSFCVLTAN WSAEGGIRAQ 
KEIGKGFVHL PLEELAEKLR EVGHRYPQKR AEFIVENRKL LGKLKNLVKG DPFQSREFLV 
RNAKGIGWKE ASHFLRNTGV EDLAILDKHV LKLMKRHGLI QEIPKGWSKK RYLYVEEILR 
KVAEAFGESP GKFDLYLWYL VKGKVDK