| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0690 |
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| Symbol | |
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| ID | 6092107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 710378 |
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| End bp | 712279 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642487876 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001738726 |
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| Protein GI | 170288488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000142344 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA AAGTGAAGAA ATATATCGTT GTTGAATCTC CTGCCAAGGC GAAGACGATC
AAGAGTATTC TTGGGAATGA GTACGAAGTA TTCGCTTCGA TGGGGCACAT CATAGACCTT
CCCAAGAGCA AGTTCGGTGT GGATCTGGAA AAGGATTTCG AACCGGAATT CGCGGTGATA
AAAGGGAAAG AGAAGGTAGT TGAAAAGCTG AAGGATCTTG CAAAAAAAGG CGAACTGCTC
ATCGCTTCTG ATATGGATAG AGAAGGGGAA GCCATAGCCT GGCACATAGC CAGGGTAACG
AACACACTGG GGAGAAAGAA CAGGATCGTG TTCTCTGAGA TCACTCCTCG TGTGATAAGA
GAAGCCGTTA AGAATCCTCG AGAGATTGAC ATGAAGAAAG TTCGTGCGCA GCTTGCAAGA
AGGATTTTAG ACAGGATCGT TGGTTATTCT CTGAGTCCGG TTCTCTGGAG AAACTTCAAA
TCCAATTTGA GCGCTGGTAG AGTCCAATCA GCAACCTTGA AGCTCGTTTG TGACAGAGAG
AGAGAAATCC TCAGGTTTGT GCCAAAGAAG TACCACAGGA TCACCGTCAA TTTCGATGGT
CTCACAGCAG AAATAGATGT GAAAGAAAAG AAGTTCTTCG ACGCTGAAAC GTTGAAAGAA
ATCCAGAGCA TAGACGAACT CGTTGTAGAA GAGAAAAAGG TTTCTGTGAA AAAGTTTGCG
CCTCCAGAAC CCTTCAAAAC CAGTACCCTC CAGCAGGAAG CGTATTCTAA ACTGGGTTTC
TCCGTTTCCA AAACCATGAT GATTGCCCAG CAGTTGTATG AAGGCGTGGA AACAAAAGAT
GGGCATATCG CGTTCATAAC CTATATGAGA ACAGATTCAA CGCGTGTTTC GGACTACGCG
AAAGAAGAAG CCAGAAATCT GATAACGGAG GTCTTTGGAG AAGAGTACGT TGGTTCAAAG
AGAGAAAGGA GAAAGAGCAA CGCAAAAATA CAGGATGCGC ATGAGGCGAT TCGTCCCACG
AACGTTTTCA TGACACCTGA AGAAGCGGGA AAATACCTGA ATTCTGACCA GAAAAAACTC
TACGAGTTGA TATGGAAGAG ATTTCTCGCA TCGCAAATGA AGCCTTCTCA ATACGAGGAA
ACTCGTTTTG TCCTGAGAAC AAAGGATGGG AAGTACAGAT TCAAGGGAAC GGTGCTGAAG
AAGATTTTCG ATGGGTACGA AAAGGTGTGG AAGACGGAAA GAAACACGGG AGAGTTTCCT
TTCGAAGAGG GAGAATCTGT GAAACCGGTG GTTGTAAAAA TAGAGGAACA GGAAACCAAA
CCGAAACCAA GGTACACAGA GGGTTCTCTT GTAAAAGAAA TGGAAAGACT CGGTATAGGT
CGTCCCAGCA CATATGCGTC CACGATAAAG CTTTTGCTGA ACAGGGGTTA CATAAAAAAG
ATCAGGGGCT ATCTCTATCC AACGATCGTT GGAAGCGTTG TCATGGATTA TCTGGAGAAA
AAGTACTCTG ATGTTGTTAG CGTTTCCTTC ACAGCTGAAA TGGAAAAGGA CCTCGATGAA
GTCGAACAGG GTAAGAAAAC AGACAAAATC GTTCTGCGGG AGTTTTATGA ATCCTTTTCC
AGTGTGTTCG ACAGGAACGA CAGAATTGTG GTTGATTTTC CGACGAACCA GAAATGTTCG
TGTGGAAAGG AAATGAGGCT CTCTTTTGGA AAATACGGCT TCTATTTGAA ATGCGAGTGT
GGTAAAACCA GAAGCGTGAA AAACGATGAA ATTGCGGTCA TAGACGATGG AAAAATATTC
CTGGGGAGGA AAGACAGTGA GAGTGGCTCT CCTGATGGGA GGAGTGTCGA GGGAAAGGGA
AATCTCTCTG AGAAGCGGAG AAAGGGTAAA AAAGGCTCTT GA
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| Protein sequence | MSKKVKKYIV VESPAKAKTI KSILGNEYEV FASMGHIIDL PKSKFGVDLE KDFEPEFAVI
KGKEKVVEKL KDLAKKGELL IASDMDREGE AIAWHIARVT NTLGRKNRIV FSEITPRVIR
EAVKNPREID MKKVRAQLAR RILDRIVGYS LSPVLWRNFK SNLSAGRVQS ATLKLVCDRE
REILRFVPKK YHRITVNFDG LTAEIDVKEK KFFDAETLKE IQSIDELVVE EKKVSVKKFA
PPEPFKTSTL QQEAYSKLGF SVSKTMMIAQ QLYEGVETKD GHIAFITYMR TDSTRVSDYA
KEEARNLITE VFGEEYVGSK RERRKSNAKI QDAHEAIRPT NVFMTPEEAG KYLNSDQKKL
YELIWKRFLA SQMKPSQYEE TRFVLRTKDG KYRFKGTVLK KIFDGYEKVW KTERNTGEFP
FEEGESVKPV VVKIEEQETK PKPRYTEGSL VKEMERLGIG RPSTYASTIK LLLNRGYIKK
IRGYLYPTIV GSVVMDYLEK KYSDVVSVSF TAEMEKDLDE VEQGKKTDKI VLREFYESFS
SVFDRNDRIV VDFPTNQKCS CGKEMRLSFG KYGFYLKCEC GKTRSVKNDE IAVIDDGKIF
LGRKDSESGS PDGRSVEGKG NLSEKRRKGK KGS
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