| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0683 |
|---|
| Symbol | uvrC |
|---|
| ID | 6092100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 702312 |
|---|
| End bp | 703985 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 642487869 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001738719 |
|---|
| Protein GI | 170288481 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGAGA AGATCAGAAA GAAGATACTC CTCGCTTCTG AAGAACCTGG TGTTTACATC
TTCAAAAACA AAGGTGTTCC CATCTACATA GGAAAAGCAA AGAGATTGTC CAGTAGATTG
AGGAGTTACC TCAATCCCCA GACGGAGAAA GTGTTCAGAA TCGTCGAAGA AGCTGACGAA
CTGGAAACGA TCGTTGTGAT GAACGAAAGG GAAGCGTTCA TACTCGAGGC GAATCTCATA
AAGAAGTACA GGCCGAAGTA CAACGTTCGT CTCAAAGACA CGAATTTCTA TCCTTACATC
AGGATATCCG ATGACGAGAT ACCGTACGTT GAGATCGTGA AGAGAAAACT GAGGGATGGA
ACGTACTTCG GCCCCTACAC CAGTGTTCAA TTCGTCAGAA ATCTGCTGGA AATCCTTCAG
AAAATAATGG GATTCAGAAC CTGTAAATCC GATTTGAAAA GGATAAAGAG GCCCTGTTTT
CTTTACCATC TTGGCAGATG TATCGGCCCG TGCATTGGAA ACATAGAATC GCATGAAGAA
GCAATAAGAA AGCTGAGAGA GTTTCTCTCG GGAAACATGG AAGAAGTCTT CGATTATCTG
AAAGAAAAGA TGGAAACTCA CAGCAAAATG CTCGATTTTG AGAACGCTGC AAAGTACAGG
GACCTTCTTT TGAATCTGTC GAATGTTCTG GAATCTCAGG GTGTGGTTTT TGAAGAAAAT
ATCAATTGTG ATGTTCTGGT CCATGCACAC GACCTGTTCG TGGTTCTGAG AGTCAGGAAT
GGTTACTTGG TGGGAAAGAT CTCCTTTGAA ATGGAAGGGG GAAGTGTGGA AGATTTCATC
AGAGAATACT ACATATCTGG GAGAGGTGAT ATCCCGAAAA CTCTCATTCT GGAGAGTGAT
CTGGACGAAA TGGATTACTC GTCTCTCGGT TTTGAGTATG TAGGACCGCC ACGCTCCACC
ACAGAAGAAG ATCTTCTTGA GAAAGCAAAG AAAAACCTGG AAAACGAGTT AAAAATGAGA
GGATTGAGGA AGGAAGCGCT CGAAGAATTG ATGAAGCTCC TGAACATGAA GGATTTTCCG
TACAGGATAG AAGGGATCGA TATTTCTCAT CTTCAGGGAA AATACACCGT GGCTTCTCTG
GTGGTGTTTG AAGATGGATT TCCCAAAAAG AGCGATTACA GACGTTACAA GATCGAACAG
GATCATCCCG ATGATTACGA ATCGATAAGA ACAGTTGTGA AAAGAAGATA TTCGAAACAC
CCGCTTCCGA ATCTTCTGTT CGTGGATGGA GGAATAGGTC AGGTGAACGC TGCTATCGAA
GCGTTGAAGG AAATAGGAAA GGACTGTCCT GTGGTTGGCC TCGCGAAGAA GGAAGAGACC
GTTGTCTTTG AAAACAGAGA AATACACCTT CCACACGATC ACCCGGTTTT GAGGCTTCTC
GTTCAGATAA GAGACGAAAC ACATAGATTC GCTGTGAGTT ACCACAGAAA GCGGAGGGAG
AAAGAATCAC TCAGGTCTGT TCTTGACAAT GTACCCGGAA TAGGTCCCAT CAGAAAGAAA
AAGCTCATTG AACACTTTGG TTCCCTGGAG AATATTCGTT CTGCATCCCT AGAGGAAATA
GCAAGGGTCA TTGGTAGTAC TGAGATAGCA CGAAGGGTCC TGGATATTTT GTAA
|
|---|
| Protein sequence | MKEKIRKKIL LASEEPGVYI FKNKGVPIYI GKAKRLSSRL RSYLNPQTEK VFRIVEEADE
LETIVVMNER EAFILEANLI KKYRPKYNVR LKDTNFYPYI RISDDEIPYV EIVKRKLRDG
TYFGPYTSVQ FVRNLLEILQ KIMGFRTCKS DLKRIKRPCF LYHLGRCIGP CIGNIESHEE
AIRKLREFLS GNMEEVFDYL KEKMETHSKM LDFENAAKYR DLLLNLSNVL ESQGVVFEEN
INCDVLVHAH DLFVVLRVRN GYLVGKISFE MEGGSVEDFI REYYISGRGD IPKTLILESD
LDEMDYSSLG FEYVGPPRST TEEDLLEKAK KNLENELKMR GLRKEALEEL MKLLNMKDFP
YRIEGIDISH LQGKYTVASL VVFEDGFPKK SDYRRYKIEQ DHPDDYESIR TVVKRRYSKH
PLPNLLFVDG GIGQVNAAIE ALKEIGKDCP VVGLAKKEET VVFENREIHL PHDHPVLRLL
VQIRDETHRF AVSYHRKRRE KESLRSVLDN VPGIGPIRKK KLIEHFGSLE NIRSASLEEI
ARVIGSTEIA RRVLDIL
|
|---|
| |