Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0505 |
Symbol | |
ID | 6091920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 504549 |
End bp | 505961 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642487692 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001738544 |
Protein GI | 170288306 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAACA TCGTATTTGT AGGTGCAGGG AGTGTGAGGT ACACGATAAA ACTGGTAGGT GATCTGGCAA AGACAAAAGA GCTATACGGG TCAAGACTGG TTTTGATGGA CATCGACGAA GAAAGGCTGA AGGCAACCTT CACACTCGTG AAGAAGTACC TGAAGGAGTT GAAGGCAGAA TATGAGGTGG AAGAGACGAC AAGCCTTGAG AAGGCACTTG AAGGGGCAGA GTTTGTCATC AACACAGCAC TCTACAGGGC ACCTGGACAT GAAGACGGGT ACGTGCACTA CGAGATCATG AGGGAAGTAG GGGAAAGACA CGGTTACTAC AGGGGAATAG ACAGCCAGGA GCTGAACATG GTATCGGACT ACTACACTTT GAGCAACTAC AACCATCTGA AGATGAGCCT TGATATAGCA AAAGCTGTGG AGAAAATCTC ACCGGATGCA TGGATACTGC AGACGGCAAA TCCCGTCTTT GAGATCACCC AACTTGTGAA GAGGCTGACG AAGGCGAAGA TAGTGGGGTT CTGCCATGGA TACGCACACG TGTTTCACCT TGCGAAGGTG CTTGGGGTAG AACCGGAAGA ACTCGACTGG CAGGTAGCAG GGGTAAACCA TGCGATATGG CTGAACAGGT TCAGGTGGAA AGGAGAGGAC CTCTATCCCA GGCTGGATGA GTGGATAGAG AAGAACGCGT CGAACTGGGA GCCGAAGAGT CCATGGGACG TGGACTTTTC ACCTGCTGCG ATAGACATGT ACAGGTTTTA CGGGATGTAT CCGATAGGAG ACACGGTGAG GAGTGGGACG TGGAAGTACC ACTACGATCT TGAGACGAAG AAGAAGTGGT TCGGAAAGTA TGGAGGAATA GACAACGAAG TGGAAAGGCC GAAGTTCTAC GAGAGTTTGA GGAAGCAGAG AAAGAGGCTG ATGGAACTTG CGAAAGAAGT GGAGAAAGAT CCGACGATAG AGCTCACGAA GGTATGGCCT GAGGTGTTCA CAACAGGAAG TGAAAGTGTA GAGCAGCACA TACCTTTCAT CAACGCCCTT GTGAACGGGA AGAAAGCAAG GCTGGTTTTG AACGTGGAGA ACAGAGGGAC GATAAAGGGG ATACCGGACG ATGTGGTTGT GGAGGTGCCG GTGATAGTGG ACAAGGAAGG GATACATCCG GAGAAGATAG AGCCTGATCT TACGGAGAGG GTCAAGAAGT TCTATCTTCT TCCGAGGATT TTGAGGATGG AATGGGCACT TGAGGCGTTC ATCAGTGGTG ACAGGAGGGT TTTTGAGGAG ATTCTCATCA GAGATCCCAG AACAAAATCC TACGAACAGG TCGTTGCCGT CATCGACGAT ATCCTCAACC TGCCTTTTAA CGAGGAAATG AAAAAGCATT ATTCAAGAGG AGGAAAGAAT TGA
|
Protein sequence | MPNIVFVGAG SVRYTIKLVG DLAKTKELYG SRLVLMDIDE ERLKATFTLV KKYLKELKAE YEVEETTSLE KALEGAEFVI NTALYRAPGH EDGYVHYEIM REVGERHGYY RGIDSQELNM VSDYYTLSNY NHLKMSLDIA KAVEKISPDA WILQTANPVF EITQLVKRLT KAKIVGFCHG YAHVFHLAKV LGVEPEELDW QVAGVNHAIW LNRFRWKGED LYPRLDEWIE KNASNWEPKS PWDVDFSPAA IDMYRFYGMY PIGDTVRSGT WKYHYDLETK KKWFGKYGGI DNEVERPKFY ESLRKQRKRL MELAKEVEKD PTIELTKVWP EVFTTGSESV EQHIPFINAL VNGKKARLVL NVENRGTIKG IPDDVVVEVP VIVDKEGIHP EKIEPDLTER VKKFYLLPRI LRMEWALEAF ISGDRRVFEE ILIRDPRTKS YEQVVAVIDD ILNLPFNEEM KKHYSRGGKN
|
| |