Gene TRQ2_0500 details

Gene Information

• Locus tag: TRQ2_0500
• ID: 6091915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 496773
• End bp: 498704
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 642487687
• Product: extracellular solute-binding protein
• Protein accession: YP_001738539
• Protein GI: 170288301
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0747] ABC-type dipeptide transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.464453
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAGAT CGCTTGTAGT TGCTCTGGTT CTTTTTTCAT TGATGATGTT TGGCCTCGGC 
CTGAAAGAGG TTGTGCCCGG AGAACAGTAC AATCTTTCTG ACTATGAACG TCTGACAGGG 
AAGAAGATCA CAGAGTTTCA CGAAGCCCCT GCGCTATCAG AACTTGTAAA GCAGGGCAAA 
CTCCCACCTG TTGAAGAAAG ACTTCCGAAA AACCCACTTG TTGTAACTCC TCACGAGGAA 
ATTGGAGAGT ACGGGGGTGT TTTAAGAAGA GTTTGGTACG GCATAGCAGA TTGGTGGAAC 
ATAGGAAGAA TATGTTTCGA AGGATTAATT ATGGCGGATA AAACCGGAAG CGAGTTCTTA 
CCGAATATAT TCGAGGATTT GAGAATGGAA GAAAATGGTA AAGTGTTTAT AGCCAAAATA 
AGAGAAGGCT TGAAGTGGTC TGATGGAGTA CCAGTAACAA CAGAAGATGT TCTTTTCTGG 
TATCATGATA TCTTTCAAAA CAAAAACTTT ACATCTGCCA TTCCGGACTT TTTTAAGCCT 
GGCGGAGATT TCACAATAGA AGCTGTGGAT ACCTATACTT TTAAAATTAT CTTTCAGAAA 
CCCTATCCAC TTTTCCCACT ATTTCTAACT GACCAAATAT ATTCGGCTAT TCTGCTTCCT 
TCCCATTATG TCAGAAATTT CCTTCCAGAA TATATTGGTC AAGACAAAAT CGAGAAACAA 
GCTAAAGAAA AGGGATACTC TTCATGGCAA CAGTTTGTGC TTGATTATTG TTTATTAGAA 
AACGCTTGGG TGAGAAATCC TGACCTTCCT GTTCTTTTCC CTTGGAAACT TTCCGATCGT 
TCTACAGACG AGCTTACCAT TTTCGAAAGA AATCCTTATT ATTTCAAAGT TGATACTGAA 
GGAAATCAAT TGCCTTATAT TGACGAAATA CACCTCTACA GAGTAGCAAA TAAGCAAATA 
CTCCTTATGA AGGCTCTTGC GGGTGAAATT GACTTCCAAA TGAGGGGATT TACAACTGAT 
GATTATCAAA TTCTAACTTC GAATGCCGAA AAAGGAGGAT ACAGAGTTAT TCTGGTAAAG 
AAAACCACTG GTAGTGGGAC CTCTCTCTTC ATGAACCAGA CTTACACCGG GGATCCTATC 
ATAGCTGAAT TATTAAAGAA TCCAAAGTTT AGATATGCTA TCTCTTTAGC AATAAACCGT 
GAAGAAATAC TACATCTTGC CTATTTAGGT CTTGGAGAAC CACGTCAAGC TTCGCTTGTG 
ACAGGAGTTA AATACTACGA TCCTGAATGG GAAAAGGCAT TTGCTGAATA CGATCCAGAA 
AGAGCAAATA AACTTCTTGA TGAAATAGGA CTTGAAAAAC GTGATAAAGA AGGATACCGA 
CTAAGACCAG ATGGCAAAAG ACTAGAGCTC ATTATAGAAT ATACTGAACC ACGATCTGAA 
TTAGAACTTA TAAAATCCTA CATTGAATCC TTAGGAATAA AGGTTCTTCT AAAACAGGAA 
GAAAGATCAC TATGGTTTAC AAGGCTGGAA GCAGGAGAGA TGCAAATAGG TGTTTGGGTG 
TTTGGATCCA TTTCGATTTT CTTAGATCCA GATATGATGG GATATAAATG GGCTCCTTTA 
GCTTATCAAT GGTATGTTAA TGGAAAAAAA GGAGGTATTG AACCAGAAAA AGGAACTGAC 
CTCAGAAAAC TTTACGATTT GTGGGACCAA ATATTGTTTG AACCCAATGA GGAAAAAAGA 
GATGCACTCG TAAAAGAACT CATAAATCTC TTCAAAAAAA ACATATGGAT AATTGGTACA 
GTAGGTGAAT TCCCTCTTCC TGCAGTAGTG AAAGACAATC TTAAAAATGT CCCTGAAGGA 
TTACTTTTTG ATTTTCATTT GTTAAAAACA CCAAAAAACT TCAGGCCAGA ACAGTTCTTC 
TTCAAAAAAT AG 

 

Protein sequence

MRRSLVVALV LFSLMMFGLG LKEVVPGEQY NLSDYERLTG KKITEFHEAP ALSELVKQGK 
LPPVEERLPK NPLVVTPHEE IGEYGGVLRR VWYGIADWWN IGRICFEGLI MADKTGSEFL 
PNIFEDLRME ENGKVFIAKI REGLKWSDGV PVTTEDVLFW YHDIFQNKNF TSAIPDFFKP 
GGDFTIEAVD TYTFKIIFQK PYPLFPLFLT DQIYSAILLP SHYVRNFLPE YIGQDKIEKQ 
AKEKGYSSWQ QFVLDYCLLE NAWVRNPDLP VLFPWKLSDR STDELTIFER NPYYFKVDTE 
GNQLPYIDEI HLYRVANKQI LLMKALAGEI DFQMRGFTTD DYQILTSNAE KGGYRVILVK 
KTTGSGTSLF MNQTYTGDPI IAELLKNPKF RYAISLAINR EEILHLAYLG LGEPRQASLV 
TGVKYYDPEW EKAFAEYDPE RANKLLDEIG LEKRDKEGYR LRPDGKRLEL IIEYTEPRSE 
LELIKSYIES LGIKVLLKQE ERSLWFTRLE AGEMQIGVWV FGSISIFLDP DMMGYKWAPL 
AYQWYVNGKK GGIEPEKGTD LRKLYDLWDQ ILFEPNEEKR DALVKELINL FKKNIWIIGT 
VGEFPLPAVV KDNLKNVPEG LLFDFHLLKT PKNFRPEQFF FKK